Agent-based modeling framework in Julia

Arche is an archetype-based Entity Component System (ECS) for Go.

nlrx NetLogo R

R Package for individual based epidemiological models

Covid Epidemics Simulation with Simpy

Multiscale Modelling Tool - mathematical modelling without the maths

Everything you need to rapidly build a model with the Arche Entity Component System (ECS).

Epidemiology modelling framework for the Thanzi la Onse project

A spatially explicit trait- and individual-based microbial systems modelling framework

DEPONS model: Simulating effects of disturbances on the North Sea harbour porpoise population

Spatial individual-based model of malaria with a focus on drug resistance evolution.

HostSwitch: An R Package to simulate host switching by a parasite

OpenGL graphics and plots for the Arche Entity Component System (ECS).

How does disturbance on a landscape affect the establishment of new polyploid plant species?

Taskview for all IBM related 📦 packages in the R universe

Rcpp package providing an individual-based model to simulate the evolution of movement strategies under risk of pathogen spread.

Source code of the model used in Cornejo-Donoso, J., Einarsson, B., Birnir, B., Gaines, S.D. (2017) Effects of fish movement assumptions on the design of a marine protected area to protect an overfished stock. PlosONE 12(10): e.0186309 https://doi.org/10.1371/journal.pone.0186309

Supplementary material for "Identifying density-dependent interactions in collective cell behaviour"

Python individual-level SIRD model for studying vaccination prioritization