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microrna-target-prediction

Here are 3 public repositories matching this topic...

AltasChen / miRTarDS

miRTarDS is a microRNA target interaction database, including 1,220,904 MTIs from miRTarbase, miRDB, miRWalk, involving 6,085 genes and 1,261 pre-miRNAs. The MTIs prediction achieved an F1 score of 0.889 in accurately distinguishing protein-level experimentally (western blot & reporter assay) validated MTIs and predicted MTIs.

bioinformatics database mirna microrna-target-prediction

Updated Dec 16, 2024
Python

seonwoo-min / TargetNet

Official Pytorch implementation of TargetNet, Bioinformatics 2022

pytorch targetnet microrna-target-prediction

Updated Apr 9, 2022
Python

bioinfoUQAM / mirLibSpark

microRNA validation using Spark framework

spark ngs mirna ngs-analysis microrna ngs-pipeline microrna-target-prediction microrna-prediction plant-microrna

Updated Sep 28, 2021
Java

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