A spatial omics data analysis tool that enables both unsupervised and supervised discovery of complex tissue cellular neighborhoods from cell phenotypes.
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Dec 7, 2024 - Python
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multiplexed-imaging-analysis
Here are 6 public repositories matching this topic...
HistoJS: Web-Based Analytical Tool for Multiplexed Images. Limited Github Online Demo 👇
image-processing proteomics phenotyping multichannel single-cell spatial-data-analysis ome-tiff cell-segmentation whole-slide-imaging proteomics-data-analysis digital-slide-archive cell-cell-interaction multiplexed-imaging multiplexed-imaging-analysis mibiscope spatial-biology
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Feb 29, 2024 - JavaScript
Maximum Entropy Based HI-C/Distance Map - Polymer Physics - Structures Method
fish hi-c maximum-entropy-model multiplexed-imaging-analysis chromosome-reconstruction chromosome-organization maximum-entropy-principle maximum-entropy-distribution
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Aug 6, 2024 - Jupyter Notebook
Computational pipeline for multiplexed analysis of tumors.
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Sep 12, 2021 - Jupyter Notebook
Rapid and efficient image preprocessing pipeline for multiplexed spatial proteomics. Code to compare several techniques to denoise Imaging Mass cytometry
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Dec 3, 2024 - Jupyter Notebook
Rapid and efficient image preprocessing pipeline for multiplexed spatial proteomics. Code to compare several techniques to denoise Imaging Mass cytometry
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Updated
Dec 3, 2024 - Jupyter Notebook
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