nma
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MODE-TASK plugin for PyMOL
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Apr 28, 2023 - C++
Reproduce the results from the paper: "Decision Curve Analysis for Personalized Treatment Choice between Multiple Options. K. Chalkou, et. al. Med Decis Making . 2023 Apr;43(3):337-349. doi: 10.1177/0272989X221143058." This methodological paper describes the methods for evaluating the clinical utility of prediction model with multiple treatments.
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Jul 21, 2023 - R
This repository contains code and notebooks for Neuromatch Academy (NMA2025) Computational Neuroscience course project analyzing the Allen Institute Visual Behavior 2-Photon (2P) dataset.
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Aug 8, 2025 - Jupyter Notebook
Visualize Multi-Component Interventions in Network Meta-Analysis
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Jan 18, 2023 - R
Reproduce results feom the paper "A two-stage prediction model for heterogeneous effects of treatments. K. Chalkou, et. al. Statistics in Medicine. 2021 Sep 10;40(20):4362-4375. doi: 10.1002/sim.9034"
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Jul 21, 2023 - R
Stochastic Search Inconsistency Factor Selection
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Mar 24, 2025 - R
Elastic Network Model computation featuring GPU acceleration and parallel processing
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Sep 3, 2025 - Python
Reproduce results from the paper "Combining randomized and non-randomized data to predict heterogeneous effects of competing treatments."
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Jul 21, 2023 - R
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