StarDist - Object Detection with Star-convex Shapes
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Oct 5, 2024 - Python
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nuclei-segmentation
Here are 31 public repositories matching this topic...
Segment Anything for Microscopy
segmentation cell-segmentation microscopy-images nuclei-segmentation napari segment-anything mitochondria-segmentation
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Dec 22, 2024 - Jupyter Notebook
Encoder-Decoder Cell and Nuclei segmentation models
ai ml pytorch accelerate microscopy cell-segmentation digital-pathology panoptic-segmentation nuclei-segmentation tissue-segmentation pytorch-lightning cellpose timm stardist hovernet omnipose
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Jul 5, 2024 - Python
[IMAVIS] Official implementation of "ASF-YOLO: A Novel YOLO Model with Attentional Scale Sequence Fusion for Cell Instance Segmentation".
deep-neural-networks yolo medical-image-computing medical-image-processing cell-segmentation nucleus-detection computer-vision-algorithms instance-segmentation deep-learning-framework cell-detection medical-image-analysis data-science-bowl-2018 medical-image-segmentation nuclei-segmentation lesion-segmentation hematoxylin-eosin-staining breast-cancer-segmentation detection-segmentation-algorithm histopathology-image-analysis breast-cancer-cell
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Dec 15, 2024 - Python
This repository contains my implementations of the algorithms which we used for evaluation of the MoNuSeg challenge at MICCAI 2018.
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Jul 22, 2021 - Jupyter Notebook
StarDist plugin for napari
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Aug 24, 2024 - Python
MICCAI2023 - TransNuSeg: A Lightweight Multi-Task Transformer for Nuclei Segmentation
medical-image-segmentation nuclei-segmentation swin-transformer miccai2023 shared-attention-heads lightweight-multi-task-framework
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Feb 5, 2024 - Python
Nuclei segmentation and classification (Cancer cells)
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Jun 4, 2024 - Jupyter Notebook
Feature extraction from GEOJson nuclei and tissue segmentation maps
graph-algorithms feature-extraction spatial-data-analysis morphological-analysis digital-pathology clustering-methods roi-selection nuclei-segmentation regionalization tissue-segmentation immune-infiltration whole-slide-image whole-slide-annotation
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Aug 5, 2024 - Python
GradMix for nuclei segmentation and classification in imbalanced pathology image datasets: MICCAI 2022
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Sep 29, 2022 - Jupyter Notebook
The goal is to segment individual nuclei in microscopy images.
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Jan 11, 2019 - Jupyter Notebook
H&E ROI-Level and WSI-Level Nuclei Segmentation with HoVer-Net
deep-learning whole-slide-imaging computational-pathology biomedical-image-analysis pathology-image nuclei-segmentation pathomics hover-net he-staining
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Jul 30, 2024 - Python
Implementation of U_Net architecture for medical image segmentation purpose.
medical-imaging unet segementation unet-image-segmentation unet-keras unet-tensorflow nuclei-segmentation
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Jun 13, 2020 - Python
MICCAI-COMPAY-2021: An automatic nuclei image segmentation based on multi-scale split-attention u-net
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Sep 12, 2022 - Python
Toolbox for histopathology image analysis
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Aug 22, 2024 - Python
Predicting breast cancer outcomes using ML.
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Jan 29, 2022 - Jupyter Notebook
Official Implemenation paper published at MICCAI 2024
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Oct 16, 2024 - Jupyter Notebook
CompSegNet: An enhanced U-shaped architecture for nuclei segmentation in H&E histopathology images
deep-learning transformers convolutional-neural-networks computational-pathology gcnet nuclei-segmentation receptive-fields global-context-modeling moblilenetv2 residual-bottleneck-transformer
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Aug 12, 2024 - Python
compact version of the official hovernet impl in pytorch
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May 21, 2023 - Python
pytorch implement of AD-GAN
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Jan 22, 2023 - Python
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