A Nextflow pipeline designed to classify, align and assemble nanopore metagenomic reads.
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Updated
Nov 11, 2024 - Nextflow
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oxford-nanopore-sequencing
Here are 4 public repositories matching this topic...
Scripts supporting the manuscript submitted to the Molecular Ecology Resources Special Issue 'Omics for species conservation'
population-genomics
illumina-sequencing
conservation-genomics
oxford-nanopore-sequencing
structural-variant-discovery
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Updated
Dec 19, 2023 - Shell
A snakemake pipeline to call structure variants from ONT data
bioinformatics
bioinformatics-pipeline
structural-variations
structural-variants
long-read-sequencing
structural-variation-calling
oxford-nanopore-sequencing
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Updated
Oct 25, 2024 - Python
Data analysis framework to automatically process, compare and analyze both 2nd generation and 3rd generation sequencing data from Illumina and ONT platforms.
python
linux
illumina
genotypes
oxford-nanopore-sequencing
haplotype-building
sequencing-data-analysis
2nd-generation-sequencing
3rd-generation-sequencing
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Updated
Sep 3, 2024 - Python
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