Global Biotic Interactions provides access to existing species interaction datasets

sample linux x86_64 ELF virus

This repository has been archived, currently maintained version is at https://github.com/iii-companion/companion

dEploid is designed for deconvoluting mixed genomes with unknown proportions. Traditional ‘phasing’ programs are limited to diploid organisms. Our method modifies Li and Stephen’s algorithm with Markov chain Monte Carlo (MCMC) approaches, and builds a generic framework that allows haloptype searches in a multiple infection setting.

Parasite like creepy creatures

Accesses parasite occurrence records from the London Natural History Museum's Host-Parasite database, which contains over a quarter of a million helminth records.

Code repository for the publication: "Whole-genome sequencing of Schistosoma mansoni reveals extensive diversity with limited selection despite mass drug administration"

An R interface for dEploid. dEploid is designed for deconvoluting mixed genomes with unknown proportions. Traditional ‘phasing’ programs are limited to diploid organisms. Our method modifies Li and Stephen’s algorithm with Markov chain Monte Carlo (MCMC) approaches, and builds a generic framework that allows haloptype searches in a multiple infe…

🎧 Papers discussed on various shows on MicrobeTV

A custom bioinformatic workflow for UPDX (Universal Parasite Detection assay) sequences analysis.

Tracking for my exhibition and LTI

Chelsea Thorn Research Profile

⛔ ARCHIVED ⛔ Host and Parasite Data Across Sources

Visual white noise generator