Disease pathways in the human interactome
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Updated
Mar 20, 2018 - Python
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pathway-prediction
Here are 6 public repositories matching this topic...
Leveraging Heterogeneous Network Embedding for Metabolic Pathway Prediction
bioinformatics
deep-learning
metapath
embedding
pathway-prediction
metacyc
heterogeneous-information-networks
biocyc
pathway-tools
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Updated
Jul 8, 2021 - Python
Metabolic pathway inference using multi-label classification with rich pathway features
bioinformatics
metagenomics
logistic-regression
multi-label-learning
pathway-prediction
metacyc
biocyc
pathway-tools
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Updated
Jul 6, 2023 - Python
CHAP: Modeling Metabolic Pathways as Groups (with Augmentation)
bioinformatics
metagenomics
topic-modeling
pathway-analysis
metabolic-network
metabolic-reconstruction
pathway-prediction
metacyc
metabolic-pathways
pathway-enrichment-analysis
pathway-reconstruction
biocyc
pathway-tools
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Updated
Nov 8, 2021 - Python
Metabolic pathway inference using non-negative matrix factorization with community detection
bioinformatics
community-detection
metagenomics
multi-label-classification
metabolic-reconstruction
non-negative-matrix-factorization
multi-label-learning
pathway-prediction
metacyc
metabolic-pathways
subnetwork
biocyc
pathway2ec-association-matrix
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Updated
Sep 19, 2021 - Python
Simple classifiers to predict to which metabolic pathway given compound belongs to.
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Updated
Jul 26, 2020 - Python
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