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prinseq-lite

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subhakanta0606 / NGS-pipeline

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This repository contains the code pipeline I developed for Next Generation Sequencing (NGS) analysis during my internship at CSIR-IGIB, New Delhi. The project was completed under the guidance of Mr. Sunil Nagpal and Dr. Bhupesh Taneja. For detailed instructions and a better understanding of pipeline, please refer to the README.md file.

shell-script pear rdp cutadapt fastqc prinseq-lite sra-toolkit fasterq-dump
  • Updated Oct 7, 2024
  • Shell

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