QTL mapping with binmap data

DeepBSA is a novel bulked segregant analysis (BSA) software for the dissection of complex traits.

R package for random-effect multiple QTL mapping in autopolyploids

Parallel Implementations of the Empirical Bayesian Elastic Net Cross-Validation in R

GitHub Repository associated with the piQTL project (Mapping effects of genome-wide genetic variation to protein-protein interactions reveals molecular mechanisms of complex traits) [ Serohijos & Michnick Lab, Université de Montréal ]

GUI for binQTL

MapMaker/Exp 3.0b and MapMaker/QTL 1.1, updated to add various improvements including multithreading

Code and data from the Bredeson, Lyons, et al. Dioscorea alata var. TDa95/00328 v2 genome and analysis manuscript.

QTL Bayesian Interval Mapping

github repository for R package mpQTL

Pipeline for polymap and QTL Mapping

Analysis code for AIL B6xBFMI

MetaPipe: A High-Performance Computing pipeline for QTL mapping of large metabolomic datasets

Wheat BRIL database created using FLASK server side, angularjs is heavily used at front end

Scripts of Final Master Project

Project for my module Big Data Biology.

Repository for genomic webapplications served from GitHub pages

To enable quantitative trait loci mapping of neighbor effects, this package extends a single-marker analysis to interval mapping.

Convert HapMap file into a useable R qtl2 genotype file

To map Drosophila melanogaster gene region(s) containing resistance to infection by parasitic wasp Leptopilina boulardi.