Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
-
Updated
Nov 8, 2024 - R
#
reproduction-number
Here are 24 public repositories matching this topic...
National and subnational estimates of the time-varying reproduction number for Covid-19
-
Updated
Jun 27, 2022 - R
Python package to estimate the time-varying effective reproduction number of an epidemic from reported case numbers
-
Updated
Dec 12, 2020 - Jupyter Notebook
Real time estimation of epidemic Effective Reproduction Number for Luxembourg
algorithm
pipeline
notebook
julia
julia-language
estimation
luxembourg
ministry
covid-19
covid
reproduction-number
epidemic-outbreaks
spqeir-model
-
Updated
Oct 24, 2022 - Julia
Local area reproduction numbers and S-gene target failure.
-
Updated
Dec 11, 2021 - R
A GitHub repo for the generation of a network model to represent society with various components, the spread of the disease on this network, and the calculation of reproduction number on these simulation results.
social-network
network
disease-spread
lockdown
sir-model
disease-prediction
coronavirus
covid-19
social-distancing
reproduction-number
-
Updated
Jun 24, 2020 - Python
Subregional estimates of Rt for Covid-19 in Brazil
-
Updated
Nov 24, 2020 - R
Source code of covid-india-analysis, a project to keep track of covid19 in India
java
jsp
chartjs
data-visualization
servlet
states
data-analysis
epidemiology
india
predictions
heroku-deployment
districts
pandemic
growth-rate
arima-model
coronavirus-real-time
covid-19
reproduction-number
cumulative-trends
r0-graph
-
Updated
Jun 16, 2021 - Java
Evaluating the use of the reproduction number as an epidemiological tool, using spatio-temporal trends of the Covid-19 outbreak in England.
-
Updated
May 12, 2021 - R
COVIDHunter 🦠:construction:: An accurate and flexible COVID-19 outbreak simulation model that forecasts the strength of future mitigation measures and the numbers of cases, hospitalizations, and deaths for a given day, while considering the potential effect of environmental conditions. Described by Alser et al. (preliminary version at https://ar…
simulation
epidemiology
covid-19
covid-19-data
covid-19-tracker
reproduction-number
covidhunter
oxford-stringency-index
switzerland-case-study
-
Updated
Dec 22, 2021 - Swift
smoothing
disease
bulgaria
vaccines
arima
pandemic
coronavirus
coronavirus-real-time
covid
covid19
reproduction-number
infections
-
Updated
Sep 13, 2022 - Python
Compute the effective reproduction number for an epidemic based on positive test ratio or absolute number of cases.
-
Updated
Dec 11, 2022 - Python
O índice de contágio do COVID-19 regionalizado, por estados, municípios e até bairros, em tempo real, pode apoiar a tomada de decisões do poder público sobre como conter o contágio e como conduzir a retomada da atividade econômica de forma segura.
python
data-science
jupyter-notebook
epidemiology
volunteer
covid-19
covid
covid-19-brazil
reproduction-number
computational-epidemiology
-
Updated
Sep 30, 2022 - Jupyter Notebook
Estimating the effective reproduction number Re(t) for COVID19 in GTA, Canada
-
Updated
Jun 23, 2021 - R
Source code of covid-india-analysis, a project to keep track of covid19 in India
java
jsp
chartjs
servlet
data-viz
states
data-analysis
epidemiology
india
predictions
heroku-deployment
districts
pandemic
growth-rate
arima-model
coronavirus-real-time
covid-19
reproduction-number
cumulative-trends
r0-graph
-
Updated
May 7, 2020 - Java
-
Updated
May 2, 2021 - Python
Simulating COVID-19 projections for various scenarios and countries.
-
Updated
Apr 6, 2022 - HTML
📈 Real-time effective reproduction number for COVID-19 in the Netherlands
-
Updated
Feb 11, 2022 - Python
Improve this page
Add a description, image, and links to the reproduction-number topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the reproduction-number topic, visit your repo's landing page and select "manage topics."