A platform for sharing and reusing biomodeling studies including models, simulations, and visualizations of their results
Registry of containerized biosimulation tools that support a standard command-line interface
Ontology of algorithms for analyzing biological models, their parameters, and their outputs
Tool for validating that biosimulation software tools implement the BioSimulators standards for simulators
Template for a repository for building a BioSimulators-compliant command-line interface and Dockerfile for a biosimulation program
Utilities for building standardized command-line interfaces for biosimulation software packages
AMICI biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
An efficient Java™ solver implementation for SBML
PySCeS biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
tellurium biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
COBRApy biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
pyNeuroML simulation program via BioSimulators-compliant command-line interface and Docker container
Tutorials for BioSimulators
COPASI biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Multimodal Evaluation for Sound Event Detection (SED)
BioNetGen biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Repository of rule-based models implemented with the BioNetGen model language (BNGL) and command-line program for publishing RuleHub to BioSimulations
GillesPy2 biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Command-line program and scheduled GitHub action for publishing the BiGG model repository to BioSimulations
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