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uniprotkb

Here are 10 public repositories matching this topic...

multimeric / Unipressed

Comprehensive Python client for the Uniprot REST API

python bioinformatics api-client uniprot uniprotkb

Updated Aug 16, 2024
Python

johnnytam100 / pdb2uniprot

A Python script to map PDB ID + chain ID to UniProt ID.

bioinformatics mapping uniprot uniprot-ids bioinformatics-scripts uniprotkb pdb-files pdb-database bioinformatics-tool rcsb pdb-structure

Updated Mar 7, 2024
Python

althonos / uniprot.rs

Rust data structures and parser for the Uniprot database(s).

bioinformatics rust-library uniprot uniref uniprotkb swissprot

Updated Oct 24, 2023
Rust

ManavalanG / UniProt-genome-annotations-hg19

UniProt genome annotation data in hg19/GRCh37 coordinates

annotation genome uniprotkb hg19 grch37

Updated Jul 12, 2017
Python

proteomicsyates / PINT

PINT is a new comprehensive web-based system to store, visualize, and query experimental proteomics data obtained under different experimental conditions and projects. PINT provides a very powerful query system through the use of different proteomics-specific data query commands running over both the experimental features and external annotation…

python database wiki proteins annotations data-integration uniprot protein-quantification pint experimental-conditions uniprotkb experimental-features comprehensive-web external-annotations

Updated Aug 6, 2024
Java

Mfpfox / MAPPING

ChemoProteomic-Detected Amino Acids (CpDAAs) to missense deleteriousness predictions and ClinVar pathogenic mutations

clinvar uniprotkb chemoproteomic-studies

Updated Jul 1, 2022
Python

lvn3668 / caBIO-load-scripts

ETL scripts to populate caBIO database

python java database perl dbsnp shell-scripts pathways transcriptomics uniprotkb unigene etl-pipeline

Updated Oct 19, 2021

AndreaRubbi / Biological-Network-Creator-and-Analyzer

Biological Network Creator and Analyzer: python program able to identify the unique interactions between human proteins from Uniprot database, plot them and, if requested, analyze a subgraph with respect to some target proteins

network multithreading networkx pyhton uniprot uniprotkb hemoglobin intact

Updated Dec 13, 2019
Python

Milchdealer / isoform-lister

uniprot uniprot-ids uniprotkb

Updated Sep 29, 2020
Python

Amirreza-Mousavi / R_Meets_Uniprot

A short script for searching in Uniprot using RESTful APIs

bioinformatics r rest-api computational-biology protein protein-sequences fasta uniprot bioinformatics-scripts fasta-sequences bioinformatics-databases ebi uniprotkb

Updated Dec 17, 2021
R

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