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v1.2.1

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@mxwang66 mxwang66 released this 01 Oct 01:01
  • FASTA header ID is used as the reference name by default, instead of the name of the FASTA file.
    The header ID is everything before a space character in the FASTA header ("EPI_ISL_402124" for EPI_ISL_402124.fasta). This will change the names and content of several output files, including

    1. Default name of the .olvr file
    2. Output file names of olivar tiling (e.g., EPI_ISL_402124.html)
    3. Columns in olivar-design.csv and olivar-design.primer.bed, as well as outputs of olivar validate (e.g., olivar-val_pool-1.csv)
  • Fixed BED/ARTIC output format (see issue #17)