- Download the data by running
python3 download.pyin thedata/directory (Data courtesy of MINERVA), - For the full set of data used here, including the biomedical data, download this file and uncompress here,
- Run the experiments by picking any of the
run_*.shscripts with./run_*.shorbash run_*.sh.
- You can get a nicely formatted explanation of all of the options by running
python3 main.py --helpin the root directory, or read through theget_config()method inmain.py, - To see tensorboards, go to
outputs/tensorboardsand runtensorboard --logdir=FILE_NAME.tb --host=CUSTOM_HOST --port=CUSTOM_PORT. Port forwarding can be done withssh -L BROWSER_PORT:HOST_NAME:SERVER_PORT -N USER_NAME@SERVER,