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RecFinder

Find the repeated evolution of a trait

In this README 👇

Features

Usage

Initial setup

  1. Create a Python 3.8 or newer virtual environment.

    If you're not sure how to create a suitable Python environment, the easiest way is using Miniconda. On a Mac, for example, you can install Miniconda using Homebrew:

    brew install miniconda
    

    Then you can create and activate a new Python environment by running:

    conda create -n recfinder python=3.9
    conda activate recfinder
    
  2. Now that you have a suitable Python environment, you're ready to personalize this repository. Just run:

    pip install -r requirements.txt
    pip install recfinder
    

FAQ

Contributing

If you find a bug 🐛, please open a bug report. If you have an idea for an improvement or new feature, please open a feature request.

Method Workflow

RecFinder method workflow

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Find the repeated evolution of a trait

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