Skip to content

Navigation Menu

Appearance settings

uio-bmi

Explore
By company size
By use case
By industry
View all solutions
Topics
- AI
- DevOps
- Security
- Software Development
- View all
Explore
- GitHub Sponsors
  Fund open source developers
- The ReadME Project
  GitHub community articles
Repositories
- Enterprise platform
  AI-powered developer platform
Available add-ons
Pricing

Search code, repositories, users, issues, pull requests...

Search

Clear

Search syntax tips

Provide feedback

We read every piece of feedback, and take your input very seriously.

Include my email address so I can be contacted

Saved searches

Use saved searches to filter your results more quickly

Name

Query

To see all available qualifiers, see our documentation.

Appearance settings

You signed in with another tab or window. Reload to refresh your session. You signed out in another tab or window. Reload to refresh your session. You switched accounts on another tab or window. Reload to refresh your session.

Dismiss alert

Centre for Bioinformatics, University of Oslo

The hub of bioinformatics and computational biology at the University of Oslo

29 followers
Oslo, Norway
https://www.mn.uio.no/sbi/english/

Overview
Repositories
Projects
Packages
People

More

Overview
Repositories
Projects
Packages
People

Pinned Loading

immuneML immuneML Public

immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.

Python 68 30
compairr compairr Public

Comparison of Adaptive Immune Receptor Repertoires

C++ 27 6
graph_peak_caller graph_peak_caller Public

ChIP-seq peak caller for reads mapped to a graph-based reference genome

Python 22 9

Repositories

Loading

Type

Select type

All Public Sources Forks Archived Mirrors Templates

Language

Select language

All C C++ Cuda Dockerfile Go HTML Java Jupyter Notebook Kotlin Python R Shell TeX

Sort

Select order

Last updated Name Stars

Showing 10 of 83 repositories

immuneML Public
immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.

uio-bmi/immuneML’s past year of commit activity

Python 68 AGPL-3.0 30 0 0 Updated Jul 16, 2025
fdr_under_dependencies Public

uio-bmi/fdr_under_dependencies’s past year of commit activity

Jupyter Notebook 3 MIT 0 0 0 Updated Jun 13, 2025
ligo Public
LIgO is a tool for simulation of adaptive immune receptors and repertoires.

uio-bmi/ligo’s past year of commit activity

Python 0 AGPL-3.0 2 1 0 Updated May 27, 2025
dagsim Public
A framework and specification language for simulating data based on graphical models

uio-bmi/dagsim’s past year of commit activity

Python 19 AGPL-3.0 3 1 0 Updated May 2, 2025
compairr Public
Comparison of Adaptive Immune Receptor Repertoires

uio-bmi/compairr’s past year of commit activity

C++ 27 AGPL-3.0 6 10 0 Updated Jan 29, 2025
localega-tsd-proxy Public archive

uio-bmi/localega-tsd-proxy’s past year of commit activity

Java 0 MIT 0 6 1 Updated Jan 22, 2025
mq-interceptor Public archive
RabbitMQ interceptor for LocalEGA

uio-bmi/mq-interceptor’s past year of commit activity

Go 0 MIT 0 0 0 Updated Jan 22, 2025
crypt4gh Public archive
Crypt4GH standard implementation

uio-bmi/crypt4gh’s past year of commit activity

Java 2 MIT 6 2 6 Updated Jan 22, 2025
pilot_data_analysis_AIRR_ML_BM_2025 Public
Scripts enabling the reproducibility of pilot data analysis carried out for AIRR-ML-BM-2025

uio-bmi/pilot_data_analysis_AIRR_ML_BM_2025’s past year of commit activity

Python 0 0 0 0 Updated Jan 14, 2025
immuneml_tools Public
Galaxy tools using the immuneML conda package.

uio-bmi/immuneml_tools’s past year of commit activity

Python 1 0 0 0 Updated Jan 9, 2025

View all repositories

People

Top languages

Loading…

Uh oh!

There was an error while loading. Please reload this page.

Most used topics

Loading…

Uh oh!

There was an error while loading. Please reload this page.

Footer

© 2025 GitHub, Inc.

Footer navigation

Terms
Privacy
Security
Status
Docs
Contact

You can’t perform that action at this time.