Add @martintb suggestions #745
Workflow file for this run
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| name: PyHyperScattering CI Testing | |
| on: | |
| push: | |
| pull_request: | |
| # The branches below must be a subset of the branches above | |
| branches: [ main ] | |
| jobs: | |
| build: | |
| runs-on: ${{ matrix.os}} | |
| strategy: | |
| matrix: | |
| python-version: ['3.10','3.11'] | |
| os: [ubuntu-latest, macOS-latest, windows-latest] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Cache pip | |
| uses: actions/cache@v2 | |
| with: | |
| path: ${{ env.pythonLocation }} | |
| # Look to see if there is a cache hit for the corresponding requirements file | |
| key: ${{ runner.os }}-py${{ matrix.python-version }}-pip-${{ hashFiles('requirements.txt') }} | |
| restore-keys: | | |
| ${{ runner.os }}-py${{ matrix.python-version }}-pip- | |
| ${{ runner.os }}- | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install flake8 pytest coverage | |
| pip install pybind11 wheel | |
| pip install -r requirements.txt | |
| pip install -r requirements-bluesky.txt | |
| pip install dask | |
| - name: Lint with flake8 | |
| run: | | |
| # stop the build if there are Python syntax errors or undefined names | |
| flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
| - name: Fetch and unzip example data (Mac/Linux) | |
| if: ${{ matrix.os != 'windows-latest' }} | |
| run: | | |
| wget https://github.com/usnistgov/PyHyperScattering/releases/download/0.0.0-example-data/Example.zip | |
| unzip Example.zip | |
| wget https://github.com/usnistgov/PyHyperScattering/releases/download/0.0.0-example-data/cyrsoxs-example.zip | |
| unzip cyrsoxs-example.zip | |
| wget https://github.com/usnistgov/PyHyperScattering/releases/download/0.0.0-example-data/mask-test-pack.zip | |
| unzip mask-test-pack.zip | |
| wget https://github.com/usnistgov/PyHyperScattering/releases/download/0.0.0-example-data/PSS300nm_C_ccd100.zip | |
| unzip PSS300nm_C_ccd100.zip | |
| wget https://github.com/usnistgov/PyHyperScattering/releases/download/0.0.0-example-data/smi_example.zip | |
| unzip smi_example.zip | |
| wget https://github.com/usnistgov/PyHyperScattering/releases/download/0.0.0-example-data/CMS_giwaxs_series.zip | |
| unzip CMS_giwaxs_series.zip | |
| - name: Fetch and unzip example data (Windows) | |
| if: ${{ matrix.os == 'windows-latest' }} | |
| run: | | |
| C:\msys64\usr\bin\wget.exe https://github.com/usnistgov/PyHyperScattering/releases/download/0.0.0-example-data/Example.zip | |
| unzip Example.zip | |
| C:\msys64\usr\bin\wget.exe https://github.com/usnistgov/PyHyperScattering/releases/download/0.0.0-example-data/cyrsoxs-example.zip | |
| unzip cyrsoxs-example.zip | |
| C:\msys64\usr\bin\wget.exe https://github.com/usnistgov/PyHyperScattering/releases/download/0.0.0-example-data/mask-test-pack.zip | |
| unzip mask-test-pack.zip | |
| C:\msys64\usr\bin\wget.exe https://github.com/usnistgov/PyHyperScattering/releases/download/0.0.0-example-data/PSS300nm_C_ccd100.zip | |
| unzip PSS300nm_C_ccd100.zip | |
| C:\msys64\usr\bin\wget.exe https://github.com/usnistgov/PyHyperScattering/releases/download/0.0.0-example-data/smi_example.zip | |
| unzip smi_example.zip | |
| C:\msys64\usr\bin\wget.exe https://github.com/usnistgov/PyHyperScattering/releases/download/0.0.0-example-data/CMS_giwaxs_series.zip | |
| unzip CMS_giwaxs_series.zip | |
| - name: Test with pytest | |
| env: | |
| TILED_API_KEY: ${{ secrets.TILED_API_KEY }} | |
| run: | | |
| #pytest -v | |
| #temporarily disabling coverage for memory usage | |
| coverage run -m pytest -v | |
| - name: Report coverage | |
| run: | | |
| coverage report | |
| coverage html | |
| - name: Upload coverage report | |
| uses: actions/upload-artifact@v2 | |
| with: | |
| name: coverage-${{ matrix.os}}-${{ matrix.python-version }}.html | |
| path: htmlcov/index.html | |
| # Use always() to always run this step to publish test results when there are test failures | |
| if: ${{ always() }} |