fix: extract samples by name, so order is always in-sync with header

varfish-org · Jan 21, 2025 · 50d9f4f · 50d9f4f
1 parent 07d6c9e
commit 50d9f4f
Showing 1 changed file with 4 additions and 2 deletions.
diff --git a/src/annotate/strucvars/mod.rs b/src/annotate/strucvars/mod.rs
@@ -845,15 +845,17 @@ impl AsyncAnnotatedVariantWriter for VarFishStrucvarTsvWriter {
         }
 
         // First, create genotype info records.
-        let mut gt_it = record.samples().values();
         for sample_name in header.sample_names() {
             tsv_record.genotype.entries.push(GenotypeInfo {
                 name: sample_name.clone(),
                 ..Default::default()
             });
 
             let entry = tsv_record.genotype.entries.last_mut().expect("just pushed");
-            let sample = gt_it.next().expect("genotype iterator exhausted");
+            let sample = record
+                .samples()
+                .get(&header, sample_name)
+                .expect("sample not found");
 
             for (key, value) in sample.keys().as_ref().iter().zip(sample.values().iter()) {
                 match (key.as_ref(), value) {