build(deps): bump the noodles group with 7 updates #329
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Bumps the noodles group with 7 updates: | Package | From | To | | --- | --- | --- | | [annonars](https://github.com/varfish-org/annonars) | `0.30.1` | `0.34.1` | | [noodles-bgzf](https://github.com/zaeleus/noodles) | `0.25.0` | `0.26.0` | | [noodles-core](https://github.com/zaeleus/noodles) | `0.12.0` | `0.14.0` | | [noodles-csi](https://github.com/zaeleus/noodles) | `0.28.0` | `0.30.0` | | [noodles-fasta](https://github.com/zaeleus/noodles) | `0.30.0` | `0.32.0` | | [noodles-tabix](https://github.com/zaeleus/noodles) | `0.34.0` | `0.36.0` | | [noodles-vcf](https://github.com/zaeleus/noodles) | `0.47.0` | `0.49.0` | Updates `annonars` from 0.30.1 to 0.34.1 - [Release notes](https://github.com/varfish-org/annonars/releases) - [Changelog](https://github.com/varfish-org/annonars/blob/main/CHANGELOG.md) - [Commits](varfish-org/annonars@v0.30.1...v0.34.1) Updates `noodles-bgzf` from 0.25.0 to 0.26.0 - [Commits](zaeleus/noodles@noodles-bgzf-0.25.0...noodles-bgzf-0.26.0) Updates `noodles-core` from 0.12.0 to 0.14.0 - [Commits](zaeleus/noodles@noodles-core-0.12.0...noodles-core-0.14.0) Updates `noodles-csi` from 0.28.0 to 0.30.0 - [Commits](zaeleus/noodles@noodles-csi-0.28.0...noodles-csi-0.30.0) Updates `noodles-fasta` from 0.30.0 to 0.32.0 - [Commits](zaeleus/noodles@noodles-fasta-0.30.0...noodles-fasta-0.32.0) Updates `noodles-tabix` from 0.34.0 to 0.36.0 - [Commits](zaeleus/noodles@noodles-tabix-0.34.0...noodles-tabix-0.36.0) Updates `noodles-vcf` from 0.47.0 to 0.49.0 - [Commits](zaeleus/noodles@noodles-vcf-0.47.0...noodles-vcf-0.49.0) --- updated-dependencies: - dependency-name: annonars dependency-type: direct:production update-type: version-update:semver-minor dependency-group: noodles - dependency-name: noodles-bgzf dependency-type: direct:production update-type: version-update:semver-minor dependency-group: noodles - dependency-name: noodles-core dependency-type: direct:production update-type: version-update:semver-minor dependency-group: noodles - dependency-name: noodles-csi dependency-type: direct:production update-type: version-update:semver-minor dependency-group: noodles - dependency-name: noodles-fasta dependency-type: direct:production update-type: version-update:semver-minor dependency-group: noodles - dependency-name: noodles-tabix dependency-type: direct:production update-type: version-update:semver-minor dependency-group: noodles - dependency-name: noodles-vcf dependency-type: direct:production update-type: version-update:semver-minor dependency-group: noodles ... Signed-off-by: dependabot[bot] <support@github.com>
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Codecov ReportAll modified and coverable lines are covered by tests ✅
Additional details and impacted files@@ Coverage Diff @@
## main #329 +/- ##
==========================================
+ Coverage 74.42% 74.44% +0.02%
==========================================
Files 22 22
Lines 4806 4806
==========================================
+ Hits 3577 3578 +1
+ Misses 1229 1228 -1 ☔ View full report in Codecov by Sentry. |
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Bumps the noodles group with 7 updates:
0.30.10.34.10.25.00.26.00.12.00.14.00.28.00.30.00.30.00.32.00.34.00.36.00.47.00.49.0Updates
annonarsfrom 0.30.1 to 0.34.1Release notes
Sourced from annonars's releases.
... (truncated)
Changelog
Sourced from annonars's changelog.
... (truncated)
Commits
330e144chore(main): release 0.34.1 (#399)2ea1521chore: more changing org bihealth => varfish-org (#398)36aaf6achore: applying changed org bihealth => varfish-org (#396)84a7533chore: remove terraform notes (managed org-wide now) (#397)af7e363chore: do not organize bug issue into project any more5d01e2achore: common .github files (#392)2655ca3chore(main): release 0.34.0 (#387)6cf726cfeat: integration of new gene-wise conditions (#385) (#386)78ebc66build(deps): bump serde_json from 1.0.109 to 1.0.111 (#383)5e9801fbuild(deps): bump clap from 4.4.13 to 4.4.16 (#384)Updates
noodles-bgzffrom 0.25.0 to 0.26.0Commits
a185294Bump versions for noodles 0.60.0c790016sam/lazy/record: Add wrapper for mapping qualityd7150f6sam/lazy/record/cigar: Implement crate::alignment::record::Cigar for Cigarf251100sam/lazy/record/position: Implement crate::alignment::record::Position for Po...565fd62sam/lazy/record/flags: Implement crate::alignment::record::Flags for Flagsbc181e1sam/lazy/record/quality_scores: Implement crate::alignment::record::QualitySc...b72f33bbam/lazy/record: Qualify types3e7a4a5bam/lazy/record/quality_scores: Implement sam::alignment::record::QualityScor...e1dee24bam/lazy/record/read_name: Implement sam::alignment::record::ReadName for Rea...61b6f65sam/lazy/record/sequence: Implement crate::alignment::record::Sequence for Se...Updates
noodles-corefrom 0.12.0 to 0.14.0Commits
f8a3f7dBump versions for noodles 0.61.00820faasam/changelog: Update changelog99918fdbam/changelog: Format changelogc227d30sam/async/io/reader: Add record reader40cff7esam/async/io/reader: Move record buf reader to a modulebb1c988bam/async/io/reader: Move record reader to a module74630c3bam/async/io/reader: Return an iterator over bam::Record when querying73800dabam: Update documentationede62b7sam: Update documentation08b98eccsi/inning_index/index/reference_sequence: Fix intra-doc linkUpdates
noodles-csifrom 0.28.0 to 0.30.0Commits
f8a3f7dBump versions for noodles 0.61.00820faasam/changelog: Update changelog99918fdbam/changelog: Format changelogc227d30sam/async/io/reader: Add record reader40cff7esam/async/io/reader: Move record buf reader to a modulebb1c988bam/async/io/reader: Move record reader to a module74630c3bam/async/io/reader: Return an iterator over bam::Record when querying73800dabam: Update documentationede62b7sam: Update documentation08b98eccsi/inning_index/index/reference_sequence: Fix intra-doc linkUpdates
noodles-fastafrom 0.30.0 to 0.32.0Commits
f8a3f7dBump versions for noodles 0.61.00820faasam/changelog: Update changelog99918fdbam/changelog: Format changelogc227d30sam/async/io/reader: Add record reader40cff7esam/async/io/reader: Move record buf reader to a modulebb1c988bam/async/io/reader: Move record reader to a module74630c3bam/async/io/reader: Return an iterator over bam::Record when querying73800dabam: Update documentationede62b7sam: Update documentation08b98eccsi/inning_index/index/reference_sequence: Fix intra-doc linkUpdates
noodles-tabixfrom 0.34.0 to 0.36.0Commits
f8a3f7dBump versions for noodles 0.61.00820faasam/changelog: Update changelog99918fdbam/changelog: Format changelogc227d30sam/async/io/reader: Add record reader40cff7esam/async/io/reader: Move record buf reader to a modulebb1c988bam/async/io/reader: Move record reader to a module74630c3bam/async/io/reader: Return an iterator over bam::Record when querying73800dabam: Update documentationede62b7sam: Update documentation08b98eccsi/inning_index/index/reference_sequence: Fix intra-doc linkUpdates
noodles-vcffrom 0.47.0 to 0.49.0Commits
f8a3f7dBump versions for noodles 0.61.00820faasam/changelog: Update changelog99918fdbam/changelog: Format changelogc227d30sam/async/io/reader: Add record reader40cff7esam/async/io/reader: Move record buf reader to a modulebb1c988bam/async/io/reader: Move record reader to a module74630c3bam/async/io/reader: Return an iterator over bam::Record when querying73800dabam: Update documentationede62b7sam: Update documentation08b98eccsi/inning_index/index/reference_sequence: Fix intra-doc linkDependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting
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