chef recipe to deploy the app

.gitattributes

@@ -1,2 +1,3 @@
 *.exe binary
-*.dll binary
+*.dll binary
+binaries/om/openMalaria binary

binaries/om/readme.txt

@@ -1,3 +1,6 @@
+OpenMalaria v32
+Works on RedHat 7/CentOS 7 (with gsl and xerces-c packages are dependencies)
+
 This build was built with build-maia-release.sh
 * from user vagrant
 * at 2015-12-16

chef/README.txt

@@ -0,0 +1,4 @@
+Chef recipe to install OpenMalaria Portal
+
+Usage:
+   sudo chef-client --local-mode chef.rb

chef/chef.rb

@@ -0,0 +1,88 @@
+package 'gsl'
+package 'xerces-c'
+package 'httpd'
+package 'mod_wsgi'
+package 'python-pip'
+package 'git'
+package 'vim'
+
+bash 'postgresql respository' do
+  code <<-EOH
+  yum install -y https://download.postgresql.org/pub/repos/yum/9.6/redhat/rhel-7-x86_64/pgdg-redhat96-9.6-3.noarch.rpm
+EOH
+  not_if {::File.exist?('/etc/yum.repos.d/pgdg-96-redhat.repo')}
+end
+
+package 'postgresql96-server'
+package 'postgresql96-devel'
+
+
+bash 'postgresql initdb' do
+  code <<-EOH
+  /usr/pgsql-9.6/bin/postgresql96-setup initdb
+EOH
+  not_if {::File.exist?('/var/lib/pgsql/9.6/data/')}
+end
+
+service 'postgresql-9.6' do
+  action [:enable, :start]
+end
+
+bash 'postgresql create user' do
+  code <<-EOH
+  sudo -u postgres sh -c 'createdb om'
+  sudo -u postgres psql -c "CREATE USER om WITH PASSWORD 'om'"
+  sudo -u postgres psql -c "GRANT ALL PRIVILEGES ON DATABASE \"om\" to om;"
+EOH
+  ignore_failure true
+end
+
+file '/var/lib/pgsql/9.6/data/pg_hba.conf' do
+  owner 'postgres'
+  group 'postgres'
+  mode '600'
+  content <<-EOH
+local   all    all     ident
+host    all             all             all    md5
+EOH
+end
+
+directory 'opt/portal/aws.vecnet.org' do
+  owner 'root'
+  group 'apache'
+  recursive true
+end
+
+git '/opt/portal/aws.vecnet.org' do
+  group 'apache'
+  repository 'https://github.com/vecnet/om'
+  action :sync
+end
+
+file '/opt/portal/aws.vecnet.org/config_local.py' do
+  group 'apache'
+  mode '640'
+  content <<-EOH
+import os
+
+settings_module="website.settings.aws"
+
+os.environ["SECRET_KEY"] = "lkl39#;l=01,<ML;lodfsd;lkOP(aa;dsf90adfsadfksldfjp90sdflsklilsdfslklkj"
+os.environ["DATABASE_NAME"] = "om"
+os.environ["DATABASE_USER"] = "om"
+os.environ["DATABASE_PASSWORD"] = "om"
+EOH
+end
+
+file '/opt/portal/aws.vecnet.org/django.log' do
+   group 'apache'
+   mode '660'
+end
+
+bash 'Install python packages' do
+  code 'pip install -r /opt/portal/aws.vecnet.org/requirements/aws.txt'
+end
+
+service 'httpd' do
+  action [:enable, :start]
+end

install_centos.sh

@@ -0,0 +1,29 @@
+#!/usr/bin/env bash
+
+# http://stackoverflow.com/questions/18215973/how-to-check-if-running-as-root-in-a-bash-script
+# EUID   Expands to the effective user ID of the current  user,  initialized at shell startup.
+# This variable is readonly.
+if [ "${EUID}" -ne 0 ]
+  then echo "Please run as root"
+  exit
+fi
+
+yum install xerces-c gsl git nginx python-pip python-devel
+# Repository for PostgreSQL 9.6
+yum install https://download.postgresql.org/pub/repos/yum/9.6/redhat/rhel-7-x86_64/pgdg-redhat96-9.6-3.noarch.rpm
+yum install postgresql96-devel postgresql96
+/usr/pgsql-9.6/bin/postgresql96-setup initdb
+
+sudo cp /var/lib/pgsql/9.6/data/pg_hba.conf /var/lib/pgsql/9.6/data/pg_hba.conf.bak
+sudo sh -c 'echo "local   all    all     ident" > /var/lib/pgsql/9.6/data/pg_hba.conf'
+sudo sh -c 'echo "host    all             all             all    md5">> /var/lib/pgsql/9.6/data/pg_hba.conf'
+
+systemctl enable postgresql-9.6
+systemctl start postgresql-9.6
+
+sudo systemctl start postgresql
+sudo -u postgres sh -c 'createdb om'
+sudo -u postgres psql -c "CREATE USER om WITH PASSWORD 'om'"
+sudo -u postgres psql -c "GRANT ALL PRIVILEGES ON DATABASE \"om\" to om;"
+sudo systemctl restart postgresql-9.6
+