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vgl-hub

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  1. gfastats gfastats Public

    A single fast and exhaustive tool for summary statistics and simultaneous *fa* (fasta, fastq, gfa [.gz]) genome assembly file manipulation.

    C++ 98 10

  2. rdeval rdeval Public

    Multithreaded read analysis

    C++ 9 2

  3. teloscope teloscope Public

    A universal telomere annotation tool for genome assemblies in [.fa][.gz] format

    C++ 6

  4. gfastar gfastar Public

    A tool suite for genome assembly evaluation and manipulation

    C++ 5

  5. gnome_seeker gnome_seeker Public

    Python 1

  6. gfalibs gfalibs Public

    general purpose library for sequence manipulation

    C++ 1 3

Repositories

Showing 10 of 20 repositories
  • teloscope Public

    A universal telomere annotation tool for genome assemblies in [.fa][.gz] format

    vgl-hub/teloscope’s past year of commit activity
    C++ 6 MIT 0 0 0 Updated Mar 18, 2025
  • kcount Public

    A kmer counting tool

    vgl-hub/kcount’s past year of commit activity
    C++ 1 MIT 0 0 0 Updated Mar 18, 2025
  • gfalibs Public

    general purpose library for sequence manipulation

    vgl-hub/gfalibs’s past year of commit activity
    C++ 1 MIT 3 0 0 Updated Mar 18, 2025
  • rdeval-documentation Public

    Read The Docs documentation for rdeval

    vgl-hub/rdeval-documentation’s past year of commit activity
    0 0 0 0 Updated Mar 7, 2025
  • gfastats Public

    A single fast and exhaustive tool for summary statistics and simultaneous *fa* (fasta, fastq, gfa [.gz]) genome assembly file manipulation.

    vgl-hub/gfastats’s past year of commit activity
    C++ 98 MIT 10 1 0 Updated Mar 6, 2025
  • gfalign Public

    Assembly graph read alignment and analysis

    vgl-hub/gfalign’s past year of commit activity
    C++ 0 MIT 1 0 0 Updated Feb 14, 2025
  • teloscope-manuscript Public

    Scripts used for the rdeval manuscript

    vgl-hub/teloscope-manuscript’s past year of commit activity
    0 MIT 0 0 0 Updated Feb 13, 2025
  • rdeval Public

    Multithreaded read analysis

    vgl-hub/rdeval’s past year of commit activity
    C++ 9 MIT 2 5 0 Updated Feb 13, 2025
  • rdeval-manuscript Public

    Scripts used for the rdeval manuscript

    vgl-hub/rdeval-manuscript’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Feb 13, 2025
  • data-wrangling Public

    VGL data wrangling

    vgl-hub/data-wrangling’s past year of commit activity
    Python 0 0 0 0 Updated Jan 21, 2025
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