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@ekg ekg released this 23 Apr 09:51
· 10795 commits to master since this release
v1.7.0
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Learn about vigilant mode.

This release roughly coincides with resubmission of the vg paper. There have been a lot of changes since v1.6.0 and it would be difficult to provide a specific summary, but several items deserve mention.

  • We improve vg's mapping runtime,
  • integrate the GBWT,
  • and refresh some critical components of the indexing process (pruning and kmer generation).
  • We explore haplotype-based alignment scoring using the GBWT,
  • and enable using it as the base thread storage system for all the tools in vg.
  • We greatly improved the accuracy of the long read alignment algorithm in vg map.
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