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v0.6.0

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@dweemx dweemx released this 23 Dec 17:08
· 2427 commits to master since this release

Summary of changes:

  • Implement multi-sample params feature #20 [#79]*.
  • Reports include manifest and params information #40 [5966798, 69c7beb]*.
  • SCope tree parameters used when making loom #67 [3e3dcd0]*.
  • Implement h5 compression on final loom #69 [d765201, f2db28b, c85950d]*.
  • 10x input data now defined under params.data.tenx [fe2c30f].
  • Fix bug: differential gene expression is run on log-normalized data now (raw data was used previously) #74 [4f7d49f].
  • Fix for #77 [6a6fe8a].
  • Fix for #68 [ef02b43].

* Currently, these features are only implemented for the following pipelines: single_sample, single_sample_star, bbknn, sra_cellranger_bbknn.