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Installation

Victoria edited this page Apr 14, 2023 · 7 revisions

Dependencies

Manual installation

Prior 3Dmapper installation, the following dependencies MUST be installed.

  • BLAST standalone software version >= 2.6. Follow these instructions to download and use the command line tool.
  • Python > 3.6
  • R version > 3.5
  • GNU parallel

3Dmapper command line application installation

Execute in Terminal the following code:

git clone https://github.com/vicruiser/3Dmapper.git
cd 3Dmapper
pip install . 
sh r_dependencies.sh

Congratulations, 3Dmapper is ready to use!

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