This code has been published by BrIC Lab, Case Western Reserve University, Cleveland OH. All rights reserved.

Please cite the following papers if you use this code:

Tumor-habitat derived radiomic features that are prognostic of progression-free survival in Glioblastoma are associated with key morphologic attributes on pathology: A feasibility study Ruchika Verma, Ramon Correa, Virginia Hill, Volodymyr Statsevych, Kaustav Bera, Niha Beig, Abdelkader Mahammedi, Anant Madabhushi, Manmeet Ahluwalia, and Pallavi Tiwari Radiology:Artificial Intelligence. 2020 Nov 11;2(6):e190168 https://pubmed.ncbi.nlm.nih.gov/33330847/

Radiogenomic-based survival risk stratification of tumor habitat on Gd-T1w MRI is associated with biological processes in Glioblastoma Niha Beig, Kaustav Bera, Prateek Prasanna, Jacob Antunes, Ramon Correa, Salendra Singh, Anas Saeed Bamashmos, Marwa Ismail, Nathaniel Braman, Ruchika Verma, Virginia B Hill, Volodymyr Statsevych, Manmeet S Ahluwalia, Vinay Varadan, Anant Madabhushi and Pallavi Tiwari Clin Cancer Res. 2020 Apr 15;26(8):1866-1876 https://pubmed.ncbi.nlm.nih.gov/32079590/

Main Files: collage_feature_extraction.m : Main file to extract 3D Collage features texture_feature_extraction.m - Main file to extract texture based features shape_feature_extraction.m - Main file to extract shape features

Folders: Collage_supporting_codes - This folder consists of 3D Collage feature extraction dependencies Shape - This folder consists of shape feature extraction dependencies Texture - This folder consists of 3D texture feature extraction dependencies

(This repository was previously linked as https://github.com/ccipd/BrIC_Lab)