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Container analyses static data #355

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merged 2 commits into from
Oct 14, 2024
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@dozy dozy commented Oct 11, 2024

add static data for various containerised analyses
downgrade bwa version to match current production

  "standard" (samtools markdup method, no split, target alignment);
  non-consented human split (samtools markdup method, build37 human ref with bwa aln, target alignment);
  y-split with no target alignment (samtools markdup method, target alignments [to human] reset after y-split)
…duction version of bwa

move time-consuming libmaus2 library build further down the list
@dozy dozy assigned dkj Oct 11, 2024
@dozy dozy requested a review from dkj October 11, 2024 16:09
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dozy commented Oct 11, 2024

this should be a low-risk merge to devel - there should be no impact on production systems, and the container-based analyses have been tested

@dkj dkj merged commit 2c14149 into wtsi-npg:devel Oct 14, 2024
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2 participants