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pathogenseq v1.0.1
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@xiaoli-dong xiaoli-dong released this 20 Oct 22:17
· 44 commits to main since this release
v1.0.1
3bf0a80
  1. Added assembled contig depth information by mapping qc reads to contigs
  2. Changed the samplesheet from seven columns to five columns, removed "genome_size" and "fast5" columns
  3. Changed basecaller_mode value from "fast|hac|sup" to medaka allowed model value, such as "r1041_e82_400bps_sup_v4.2.0"
  4. Upadted nextflow_schema files to make the pipeline command line options are more readable
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