Beautiful Atoms

Batoms is a Python package for editing and rendering atoms and molecules objects using blender. A Python interface that allows for automating workflows.

Features:

• Model: space-filling, ball-stick, polyhedral, cavity and so on.
• Supported File type: cif, xyz, cube, pdb, json, VASP-out and so on.
• Supported structure: ASE and Pymatgen
• Volumetric data (Isosurface)
• Ribbon diagram for protein
• Site occupancy
• Animation
• GUI
• Support periodic boundary conditions
• Support fetch structures from MaterialProject, Pubchem and RSCB
• Flexible: Python script, run interactively or in background.
• High quality rendering: 3D models
• Free, Open Source: Easy to download and install.
• Cross-platform: (Linux, Windows, macOS)

Beautiful Atoms 2.0

Author

• Xing Wang xingwang1991@gmail.com

Dependencies

• Blender
• Python
• ASE
• numpy
• scipy
• Scikit-image
• pymatgen
• openbabel

How to use

Please vist: https://beautiful-atoms.readthedocs.io/en/latest/