Colocalization

Colocalization in overlapped variants only to avoid inconsistent finemap

Inputs

• map1: mapping of the summary data 1
• list1: summaries in the list1
• bgenInf1: bgen information for the first dataset
• sigThresh1: float treshold of significant loci
• Replicate another set above ending with 2 for dataset 2, e.g. map2: mapping
• windowKB 1500: finemap window size 1500KB

Output

• merged: merged coloc results
• list: coloc lists
• finemapped1: finemap results for dataset 1
• finemapped2: finemap results for dataset 2
• colocs: coloc results

Bug report

Create an issue here. Created and maintained by Zhili