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Feature/reference alleles #14

Merged
merged 22 commits into from
Feb 27, 2024
Merged

Feature/reference alleles #14

merged 22 commits into from
Feb 27, 2024

Commits on Feb 5, 2024

  1. created distance matrix class

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    luissian committed Feb 5, 2024
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  2. saving work. Clustering sequences is done, pending convert to allele … 

    …and fetch cluster allele representative
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    luissian committed Feb 5, 2024
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  3. commit unsaved changes

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  4. formating files

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    luissian committed Feb 5, 2024
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  5. fixing liting

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  6. fixing liting 2

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  7. fixing liting 3

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  8. updating package files

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    luissian committed Feb 5, 2024
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  9. Checking if conflicts are gone

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    luissian committed Feb 5, 2024
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  10. Added closest distance

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    luissian committed Feb 5, 2024
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Commits on Feb 6, 2024

  1. Implemented cluster center

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    luissian committed Feb 6, 2024
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  2. Completed saved reference alleles to file

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    luissian committed Feb 6, 2024
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  3. Modified project.toml to run script

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    luissian committed Feb 6, 2024
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  4. remove poetry when installed taranis

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    luissian committed Feb 6, 2024
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Commits on Feb 7, 2024

  1. added documentation for each function

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    luissian committed Feb 7, 2024
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  2. Fixed liting

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    luissian committed Feb 7, 2024
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Commits on Feb 10, 2024

  1. implemented evaluation cluster

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    luissian committed Feb 10, 2024
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Commits on Feb 17, 2024

  1. Implemented parallel and dinamic clustering

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    luissian committed Feb 17, 2024
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  2. fixed liting

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    luissian committed Feb 17, 2024
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  3. liting for eval_cluster

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    luissian committed Feb 17, 2024
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  4. liting for eval_cluster 2

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    luissian committed Feb 17, 2024
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  5. liting for eval_cluster 3

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    luissian committed Feb 17, 2024
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