Merge pull request #318 from fmaguire/master

[ci skip] This build is based on fd48a89. This commit was created by the following CI build and job: https://github.com/Benjamin-Lee/deep-rules/commit/fd48a89d93178ae26082b16c31efea52e15e0cf1/checks https://github.com/Benjamin-Lee/deep-rules/runs/527908466
Benjamin-Lee · Feb 1, 2021 · 7f77d13 · 7f77d13
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diff --git a/manuscript.html b/manuscript.html
@@ -24,7 +24,7 @@
   <meta name="author" content="Alexandra J. Lee" />
   <meta name="author" content="Beth Signal" />
   <meta name="author" content="Juan Jose Carmona" />
-  <meta name="dcterms.date" content="2021-01-28" />
+  <meta name="dcterms.date" content="2021-02-01" />
   <meta name="keywords" content="quick tips, machine learning, deep learning, artificial intelligence" />
   <title>Ten Quick Tips for Deep Learning in Biology</title>
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@@ -47,8 +47,8 @@
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-  <meta name="dc.date" content="2021-01-28" />
-  <meta name="citation_publication_date" content="2021-01-28" />
+  <meta name="dc.date" content="2021-02-01" />
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@@ -135,13 +135,13 @@
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+  <link rel="alternate" type="text/html" href="https://Benjamin-Lee.github.io/deep-rules/v/fd48a89d93178ae26082b16c31efea52e15e0cf1/" />
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@@ -153,10 +153,10 @@ <h1 class="title">Ten Quick Tips for Deep Learning in Biology</h1>
 </header>
 <p><small><em>
 This manuscript
-(<a href="https://Benjamin-Lee.github.io/deep-rules/v/4d338ed6591c956d3195054eb881ed8f11b69a21/">permalink</a>)
+(<a href="https://Benjamin-Lee.github.io/deep-rules/v/fd48a89d93178ae26082b16c31efea52e15e0cf1/">permalink</a>)
 was automatically generated
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-on January 28, 2021.
+from <a href="https://github.com/Benjamin-Lee/deep-rules/tree/fd48a89d93178ae26082b16c31efea52e15e0cf1">Benjamin-Lee/deep-rules@fd48a89</a>
+on February 1, 2021.
 </em></small></p>
 <h2 id="authors">Authors</h2>
 <p>Please note the current author order is chronological and does not reflect the final order.</p>
@@ -226,6 +226,7 @@ <h2 id="authors">Authors</h2>
 <a href="https://github.com/fmaguire">fmaguire</a><br>
 <small>
 Faculty of Computer Science, Dalhousie University
+· Funded by Donald Hill Family Fellowship
 </small></p></li>
 <li><p><strong>Benjamin J. Lengerich</strong><br>
 <img src="images/orcid.svg" class="inline_icon" alt="ORCID icon" />
@@ -786,7 +787,7 @@ <h2 class="page_break_before" id="references">References</h2>
 <div id="ref-ndSzNxZQ">
 <p>29. <strong>apple/turicreate</strong> <br />
 Apple<br />
-(2021-01-28) <a href="https://github.com/apple/turicreate">https://github.com/apple/turicreate</a></p>
+(2021-02-01) <a href="https://github.com/apple/turicreate">https://github.com/apple/turicreate</a></p>
 </div>
 <div id="ref-ra8TSEHY">
 <p>30. <strong>Auto-Keras: An Efficient Neural Architecture Search System</strong> <br />

diff --git a/manuscript.md b/manuscript.md
@@ -22,7 +22,7 @@ author-meta:
 - Juan Jose Carmona
 bibliography:
 - content/manual-references.json
-date-meta: '2021-01-28'
+date-meta: '2021-02-01'
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@@ -41,9 +41,9 @@ header-includes: '<!--
 
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+  <meta name="dc.date" content="2021-02-01" />
 
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+  <meta name="citation_publication_date" content="2021-02-01" />
 
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@@ -258,10 +258,10 @@ title: Ten Quick Tips for Deep Learning in Biology
 
 <small><em>
 This manuscript
-([permalink](https://Benjamin-Lee.github.io/deep-rules/v/4d338ed6591c956d3195054eb881ed8f11b69a21/))
+([permalink](https://Benjamin-Lee.github.io/deep-rules/v/fd48a89d93178ae26082b16c31efea52e15e0cf1/))
 was automatically generated
-from [Benjamin-Lee/deep-rules@4d338ed](https://github.com/Benjamin-Lee/deep-rules/tree/4d338ed6591c956d3195054eb881ed8f11b69a21)
-on January 28, 2021.
+from [Benjamin-Lee/deep-rules@fd48a89](https://github.com/Benjamin-Lee/deep-rules/tree/fd48a89d93178ae26082b16c31efea52e15e0cf1)
+on February 1, 2021.
 </em></small>
 
 ## Authors
@@ -341,6 +341,7 @@ Please note the current author order is chronological and does not reflect the f
     [fmaguire](https://github.com/fmaguire)<br>
   <small>
      Faculty of Computer Science, Dalhousie University
+     · Funded by Donald Hill Family Fellowship
   </small>
 
 + **Benjamin J. Lengerich**<br>

diff --git a/manuscript.pdf b/manuscript.pdf
diff --git a/references.json b/references.json
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diff --git a/spelling-errors.txt b/spelling-errors.txt
@@ -103,7 +103,7 @@ parallelized
 perceptrons
 pharmacovigilance
 phenotypes
-pre
+Pre
 pretraining
 pseudorandom
 pstew
@@ -126,7 +126,7 @@ TODO
 toolset
 TPOT
 transformative
-Translational
+translational
 triaged
 Triche
 Tschira
-Original file line number
+Diff line change
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