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add CI testing #1

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Aug 15, 2023
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81 changes: 81 additions & 0 deletions .github/workflows/test.yml
Original file line number Diff line number Diff line change
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name: CI Testing

on:
pull_request:
# allows this workflow to be reusable (e.g. by the build workflow)
workflow_call:


jobs:
tests:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ["3.8", "3.9", "3.10"]
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you can also add "3.11" here

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Shouldn't we keep it so that the mirror doesn't break? I think Anil left the gitlab-ci file in the github of bluecellulab.

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Oh, ok. You need to keep a mirror on gitlab to run some tests, am I understanding this correctly?

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I'm not sure yet, maybe we can keep it for the moment?

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ok sure ;)


steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
pip install tox-gh-actions
- name: Run tox
run: |
tox
- name: Upload to codecov
if: ${{matrix.python-version == '3.10'}}
uses: codecov/codecov-action@v3
with:
token: ${{ secrets.CODECOV_TOKEN }}
fail_ci_if_error: false

lint:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- name: Set up Python 3.10
uses: actions/setup-python@v4
with:
python-version: "3.10"
- name: Install dependencies
run: |
python -m pip install --upgrade pip setuptools
pip install tox-gh-actions
- name: Run tox
run: |
tox -e lint

examples:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- name: Set up Python 3.10
uses: actions/setup-python@v4
with:
python-version: "3.10"
- name: Install dependencies
run: |
python -m pip install --upgrade pip setuptools
pip install tox-gh-actions
- name: Run tox
run: |
tox -e examples

docs:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- name: Set up Python 3.10
uses: actions/setup-python@v4
with:
python-version: "3.10"
- name: Install dependencies
run: |
python -m pip install --upgrade pip setuptools
pip install tox-gh-actions
- name: Run tox
run: |
tox -e docs
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