renames some files and subdirs

CDCgov · Aug 18, 2021 · e025219 · e025219
1 parent 8b53929
commit e025219
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Showing 6 changed files with 3 additions and 3 deletions.
diff --git a/.github/workflows/mutations.yaml b/.github/workflows/mutations.yaml
@@ -24,15 +24,15 @@ jobs:
           #if new mutations added, then
           #check if format, required variables are correct
           #add mutations to existing latest.tsv
-          #copy latest.tsv to ${GITHUB_WORKSPACE}/mutations/archive_tsv/$now.tsv
+          #copy latest.tsv to ${GITHUB_WORKSPACE}/mutations/previous_tsv/$now.tsv
 
 
       - name: make vcf
         run: |
           echo
           #if new mutations, then
           #convert latest.tsv to latest.vcf with some script (add identifier to INFO that can be mapped to changelog)
-          #copy latest.vcf to ${GITHUB_WORKSPACE}/mutations/archive_vcf/$now.vcf
+          #copy latest.vcf to ${GITHUB_WORKSPACE}/mutations/previous_vcf/$now.vcf
 
       - name: cleanup
         run: |

diff --git a/mutations/MUTATIONS.md b/mutations/MUTATIONS.md
@@ -31,7 +31,7 @@ Before adding, submitters are expected to confirm the validity of mutations to e
 
 <details>
  <summary>PacBio</summary>
- 
+
 1. Read coverage depth >= Xx
 1. Xxxxxx
 </details>

diff --git a/mutations/SCV2_mutations_latest.tsv → mutations/SC2_mutations_latest.tsv b/mutations/SCV2_mutations_latest.tsv → mutations/SC2_mutations_latest.tsv
diff --git a/mutations/SCV2_mutations_latest.vcf → mutations/SC2_mutations_latest.vcf b/mutations/SCV2_mutations_latest.vcf → mutations/SC2_mutations_latest.vcf
diff --git a/mutations/previous_tsv/SC2_mutations_20210801.tsv b/mutations/previous_tsv/SC2_mutations_20210801.tsv
diff --git a/mutations/previous_vcf/SC2_mutations_20210801.tsv b/mutations/previous_vcf/SC2_mutations_20210801.tsv