2024-12-05 Release

What's Changed

• Xrefs by @Clare72 in #1930
• update DNa07 by @Clare72 in #1932
• add bfo import by @Clare72 in #1934
• extra definitions by @Clare72 in #1938
• Fix larval hypodermal muscles by @gouttegd in #1937
• Obsolete undefined terms by @Clare72 in #1939
• edits to Ap neurons by @Clare72 in #1940
• obsolete Tvb by @Clare72 in #1941
• new and updated larval optic lobe glia by @Clare72 in #1944
• Bolwig organ term updates by @Clare72 in #1945
• L1EM term updates by @Clare72 in #1946
• VNC hemilineages by @Clare72 in #1949
• mesoderm definitions and some disambiguation of head v trunk by @Clare72 in #1952
• obsolete region of integument defined by pigmentation pattern by @Clare72 in #1953
• Release 2024-12-05 by @Clare72 in #1954

Full Changelog: v2024-10-17...v2024-12-05

2024-10-17 Release

What's Changed

• Use latest ODK image in uberon-integration by @gouttegd in #1904
• make file with typed synonyms from EM by @Clare72 in #1907
• Ms neurons by @Clare72 in #1909
• Symbols by @Clare72 in #1910
• Definitions by @Clare72 in #1915
• neurectoderm merges by @Clare72 in #1916
• Y2 obsoletion by @Clare72 in #1917
• obsolete uncharacterized larval neurons by @Clare72 in #1918
• update FlyWire refs by @Clare72 in #1921
• VNC motor neuron paper by @Clare72 in #1922
• add SeIN128 by @Clare72 in #1924
• Cardioblast def/label update and related edits by @Clare72 in #1925
• VPNp4 obsoletions by @Clare72 in #1927
• DoOR xrefs by @Clare72 in #1928
• Release 2024-10-17 by @Clare72 in #1929

Full Changelog: v2024-08-08...v2024-10-17

2024-08-08 Release

What's Changed

• MB microglomerulus by @Clare72 in #1875
• some definition disambiguations by @Clare72 in #1879
• obsolete pSG-e clone by @Clare72 in #1880
• merge muscles 107 and 108 with parent by @Clare72 in #1883
• Proventriculus zones and cell types by @gouttegd in #1884
• Stage pattern by @Clare72 in #1886
• Embryos by @Clare72 in #1887
• Larval GRN merges by @Clare72 in #1889
• obsolete embryonic optic lobe terms by @Clare72 in #1890
• obsolete mitotic domain 26 by @Clare72 in #1891
• Immature secondary motor neuron by @Clare72 in #1893
• Generalize use of SSSOM for mappings to external resources by @gouttegd in #1895
• Larval sense organ renames by @Clare72 in #1896
• embryonic/larval synonyms by @Clare72 in #1898
• updates to DNs (and ANs) by @Clare72 in #1900
• Cm parent term by @Clare72 in #1902
• Release 2024-08-08 by @Clare72 in #1903

Full Changelog: v2024-06-13...v2024-08-08

2024-06-13 Release

What's Changed

• update labels in patterns and mapping files by @Clare72 in #1830
• NB defs by @Clare72 in #1831
• definition updates by @Clare72 in #1832
• Muscle merges by @Clare72 in #1833
• Manc new types by @Clare72 in #1834
• AHN by @Clare72 in #1838
• Neck motor neurons and muscles by @Clare72 in #1840
• DDAG neurons by @Clare72 in #1843
• some extra tidying up of dsx neurons by @Clare72 in #1844
• NPF neurons by @Clare72 in #1846
• add cell counts for types present in flywire by @Clare72 in #1847
• Lineage clone pattern by @Clare72 in #1848
• merge VUM and DUM by @Clare72 in #1849
• add LMIo and LBO5HT by @Clare72 in #1854
• synonyms and one definition for glial cells by @Clare72 in #1855
• External anatomy linkouts by @Clare72 in #1856
• External body merges by @Clare72 in #1857
• one definition by @Clare72 in #1859
• Larval neuropeptides by @Clare72 in #1860
• implement using local file to update pattern labels by @Clare72 in #1861
• Tendons by @Clare72 in #1863
• temp eclosion muscle edits by @Clare72 in #1865
• FB column obsoletions by @Clare72 in #1867
• Neuroblast obsoletions by @Clare72 in #1866
• Add 'lamina wide-field neuron'. by @gouttegd in #1869
• Remove 'alt_id' on obsolete terms. by @gouttegd in #1870
• new grouping terms for immature neurons by @Clare72 in #1872
• Release 2024-06-13 by @Clare72 in #1873

Full Changelog: v2024-04-25...v2024-06-13

2024-04-25 Release

What's Changed

• few minor edits while checking for merges by @Clare72 in #1792
• add ovarian hemocyte by @Clare72 in #1793
• VNC neurons by @Clare72 in #1795
• neuroblast comments by @Clare72 in #1797
• Prepare for ODK 1.5 by @gouttegd in #1794
• Muscle merges by @Clare72 in #1798
• Update qc-profile.txt by @Clare72 in #1800
• AL neuron pattern by @Clare72 in #1801
• lineage updates by @Clare72 in #1803
• NBs by @Clare72 in #1804
• new cell types and updates from FBrf0258823 by @Clare72 in #1806
• Add named classes to LHS of GCIs by @Clare72 in #1808
• make synonyms/labels for terms in lineage patterns by @Clare72 in #1810
• Update management of SSSOM mapping set by @gouttegd in #1811
• Add type II and type II GMCs by @gouttegd in #1813
• Add grouping terms for some neurons by @gouttegd in #1817
• Add terms for some cells of imaginal discs by @gouttegd in #1819
• Fix the Uberon integration check. by @gouttegd in #1820
• Complete mappings to CL’s photoreceptor cells. by @gouttegd in #1821
• manc known motor neurons by @Clare72 in #1822
• few more sensory neurons for manc by @Clare72 in #1823
• Unmap 'gonad' from its Uberon counterpart. by @gouttegd in #1824
• Fru clone obsoletions by @Clare72 in #1825
• obsoletion of occlusor muscle cell by @Clare72 in #1826
• Add terms for cells of embryonic tissues. by @gouttegd in #1827
• Flywire update by @Clare72 in #1828
• Release 2024-04-25 by @Clare72 in #1829

Full Changelog: v2024-02-22...v2024-04-25

2024-02-22 Release

What's Changed

• neuroblast merges by @Clare72 in #1737
• term reference updates by @Clare72 in #1740
• more neuron symbols by @Clare72 in #1741
• Receptivity by @Clare72 in #1742
• Replace the old EQWriter tool by a ROBOT plugin. by @gouttegd in #1743
• neuroblast definitions by @Clare72 in #1746
• wing pulsatile organ obsoletion by @Clare72 in #1748
• Update contributor annotations by @gouttegd in #1749
• Anlagen and primordia by @Clare72 in #1750
• Anatomical entity by segment pattern by @Clare72 in #1754
• VNC neurons by @Clare72 in #1755
• Miscellaneous fixes by @gouttegd in #1762
• neurotransmitters by @Clare72 in #1763
• Fix overlaps between CNS and PNS by @gouttegd in #1764
• Unmap Uberon's 'insect dorsal ectoderm derivative'. by @gouttegd in #1765
• Clock neuron neuropeptides by @Clare72 in #1766
• Embryonic neuromere merges by @Clare72 in #1767
• Add a Uberon/CL integration test by @gouttegd in #1771
• Flywire new types by @Clare72 in #1773
• Footpad by @Clare72 in #1774
• systematic names for flywire visual neurons and descending neurons by @Clare72 in #1775
• Bristles and their neurons by @Clare72 in #1776
• BiT neuron by @Clare72 in #1777
• ectopic spell check by @Clare72 in #1778
• Make 'muscle founder cell' neutral wrt the somatic/visceral distinction. by @gouttegd in #1781
• Eyelet and ocellus cell types by @Clare72 in #1783
• FlyWire symbols by @Clare72 in #1784
• neuroblast merges by @Clare72 in #1785
• pattern and new terms for fan-shaped body tangentials by layer and lineage by @Clare72 in #1786
• Shinomiya 2022 optic lobe types by @Clare72 in #1787
• TC-LN by @Clare72 in #1788
• Update FlyWire types by @Clare72 in #1789
• Release 2024-02-22 by @Clare72 in #1790

Full Changelog: v2023-12-07...v2024-02-22

2023-12-07

What's Changed

• add extra typedef annotations for flybase by @Clare72 in #1713
• Fru lineage by @Clare72 in #1714
• Retinal muscles by @Clare72 in #1716
• Update neuron_symbols.tsv by @Clare72 in #1717
• Canon by @Clare72 in #1718
• updates to fru/dsx/dopaminergic neurons by @Clare72 in #1719
• merge DCN and LC14 by @Clare72 in #1722
• Add "enterocyte of adult middle midgut" and related terms for PMID37722602 by @gouttegd in #1723
• Add grouping terms for FBrf0257286 by @gouttegd in #1724
• update to fru neurons by @Clare72 in #1726
• updates to autoclassify more PNS neurons by @Clare72 in #1729
• Glomeruli patterns by @Clare72 in #1730
• fru neuron definitions by @Clare72 in #1731
• linking AL PN and fru neuron terms by @Clare72 in #1733
• NB defs by @Clare72 in #1734
• Release 2023-12-07 by @Clare72 in #1736

Full Changelog: v2023-10-18...v2023-12-07

2023-10-18 Release

What's Changed

• Add more metadata to the SSSOM mapping set. by @gouttegd in #1657
• Haltere by @Clare72 in #1658
• SFS neuron by @Clare72 in #1659
• Winding paper by @Clare72 in #1660
• add oviDN-like by @Clare72 in #1663
• Update Uberon mappings by @gouttegd in #1667
• add Epi descending neuron by @Clare72 in #1666
• Symbols update by @Clare72 in #1668
• add Mip ALLN by @Clare72 in #1670
• rest of detail from Mamiya 2023 paper by @Clare72 in #1671
• update Taisz ref by @Clare72 in #1672
• add adult CA-LP neurons and update larval by @Clare72 in #1674
• TmY-ds by @Clare72 in #1677
• add sparse T neuron by @Clare72 in #1679
• remove obsoleted ref FBrf0239682 by @Clare72 in #1680
• updates to larval MBONs a1 and a2 by @Clare72 in #1682
• F-cell by @Clare72 in #1684
• replace some old curator xrefs and update orcids to https by @Clare72 in #1686
• some definitions for neuroblasts by @Clare72 in #1689
• relationships by @Clare72 in #1690
• NB defs by @Clare72 in #1691
• MB lineage and metamorphosis by @Clare72 in #1692
• Tidying up by @Clare72 in #1693
• Chen2023 by @Clare72 in #1697
• add R neuron sleep functions by @Clare72 in #1698
• add AMB and update MDN by @Clare72 in #1700
• da neuron synonyms by @Clare72 in #1702
• Looming dns by @Clare72 in #1703
• add VFB xrefs by @Clare72 in #1706
• updates to larval VNC neurons by @Clare72 in #1708
• Release 2023-10-18 by @gouttegd in #1709

Full Changelog: v2023-08-02...v2023-10-18

2023-08-02 Release

What's Changed

• Broaden 'adult oviduct mechanosensory neuron'. by @gouttegd in #1655
• Release 2023-08-02. by @gouttegd in #1656

Full Changelog: v2023-07-05...v2023-08-02

2023-07-05 Release

What's Changed

• Repository cleanup. by @gouttegd in #1635
• APDN3 and CL neurons by @gouttegd in #1639
• Add FlyWire "superclasses" of neurons. by @gouttegd in #1643
• Fix classification issues with 'optic lobe intrinsic neuron' and related classes by @gouttegd in #1645
• Add SEZ gustatory tracts and projection neurons by @gouttegd in #1647
• Add missing haltere and wing motor neurons by @gouttegd in #1648
• Add AstC-mTh neuron. by @gouttegd in #1649
• Add SPN neuron. by @gouttegd in #1650
• Release 2023 07 05 by @gouttegd in #1652

Full Changelog: v2023-05-03...v2023-07-05