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@HelmholtzAI-Consultants-Munich

HelmholtzAI-consultants-HMGU

Leading in applied AI by combining unique research questions, data and expertise with democratized access to new tools.

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  1. Automatic-Cell-Counter Automatic-Cell-Counter Public

    A GUI based on napari for counting cells automatically in cell migration experiments

    Python 43 10

  2. Quicksetup-ai Quicksetup-ai Public

    A flexible template, as a quick setup for deep learning projects in pytorch-lightning

    Python 44 7

  3. PySDDR PySDDR Public

    A python package for semi-structured deep distributional regression

    Jupyter Notebook 21 8

  4. fg-clustering fg-clustering Public

    Explainability for Random Forest Models.

    Jupyter Notebook 26 7

  5. oligo-designer-toolsuite oligo-designer-toolsuite Public

    Develop custom oligo design pipelines.

    Python 15 3

  6. napari-organoid-counter napari-organoid-counter Public

    A napari plugin for counting organoids from brightfield microscopy images with deep learning

    Python 9 2

Repositories

Showing 10 of 22 repositories
  • oligo-designer-toolsuite Public

    Develop custom oligo design pipelines.

    HelmholtzAI-Consultants-Munich/oligo-designer-toolsuite’s past year of commit activity
    Python 15 MIT 3 4 0 Updated Dec 23, 2024
  • fg-clustering Public

    Explainability for Random Forest Models.

    HelmholtzAI-Consultants-Munich/fg-clustering’s past year of commit activity
    Jupyter Notebook 26 MIT 7 2 0 Updated Dec 20, 2024
  • oligo-designer-toolsuite-AI-filters Public

    AI plug-ins for the Oligo Designer Toolsuite package

    HelmholtzAI-Consultants-Munich/oligo-designer-toolsuite-AI-filters’s past year of commit activity
    Python 2 1 0 0 Updated Dec 19, 2024
  • napari-organoid-counter Public

    A napari plugin for counting organoids from brightfield microscopy images with deep learning

    HelmholtzAI-Consultants-Munich/napari-organoid-counter’s past year of commit activity
    Python 9 MIT 2 7 0 Updated Dec 5, 2024
  • Prompt-Engineering-LLMs-Course Public
    HelmholtzAI-Consultants-Munich/Prompt-Engineering-LLMs-Course’s past year of commit activity
    Python 4 MIT 0 0 0 Updated Dec 3, 2024
  • Colorectal-Cancer-Organoids-Detection Public

    Instance segmentation tool to detect alive colorectal cancer organoids

    HelmholtzAI-Consultants-Munich/Colorectal-Cancer-Organoids-Detection’s past year of commit activity
    Python 1 MIT 1 0 0 Updated Nov 26, 2024
  • DimRed-Course Public

    Material for the dimensionality reduction course

    HelmholtzAI-Consultants-Munich/DimRed-Course’s past year of commit activity
    Jupyter Notebook 3 CC-BY-4.0 1 0 0 Updated Sep 26, 2024
  • XAI-Tutorials Public template

    Self-explanatory tutorials for different model-agnostic and model-specific XAI methods

    HelmholtzAI-Consultants-Munich/XAI-Tutorials’s past year of commit activity
    Jupyter Notebook 49 CC-BY-4.0 21 0 0 Updated Sep 24, 2024
  • data-centric-platform Public

    A tool for all-kinds segmentation in microscopy imaging which encourages data centric approaches

    HelmholtzAI-Consultants-Munich/data-centric-platform’s past year of commit activity
    Python 8 BSD-3-Clause 5 12 (1 issue needs help) 1 Updated Aug 28, 2024
  • EffiDict Public
    HelmholtzAI-Consultants-Munich/EffiDict’s past year of commit activity
    Jupyter Notebook 0 MIT 0 4 0 Updated Jun 5, 2024
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