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Releases: James-Thorson-NOAA/FishLife

Updating vignettes and adding pkgdown site

22 Dec 21:55
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Adding Zenodo DOI

31 Jan 17:29
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Fixing Zenodo to compensate for NOAA-enforced account name change

Phylogenetic structural equation models and fish morphometrics

31 Jan 17:20
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Adding major new features:

  1. Allowing trait-covariance to be estimated as a structural equation model (SEM), using input format from package:sem
  2. Switching to use package:ape for internal representation of evolutionary relatedness, either using existing taxonomic structure converted to a tree, or specifying an additive tree;
  3. Adding new options to coerce output to common objects
  4. Adding data and results when fitting phylogenetic SEM to life-history parameters as well as habitat, reproductive, spawning, trophic, morphometric, and other traits for all described fishes.

Update dependencies

03 Jan 17:27
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... to require a version of rfishbase prior to release 4.0.0, when taxa-table rfishbase::fishbase as used in FishLife::Plot_taxa was replaced by rfishbase::load_taxa()

Adding stock-recruit parameters

08 Nov 17:31
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Adding stock-recruit parameter estimates based on stock-recruit records from the RAM Legacy stock-recruit database. The addition of stock-recruit parameters completes the full life-cycle for fishes, and then allows population-dynamics parameters (generation time, intrinsic growth rate) to be calculated.

Fixed more bugs from changing name to `FishLife`

01 Aug 15:38
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Fix bugs from changing package name to `FishLife`

13 Jul 17:47
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Initial public release

13 Jul 14:00
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v1.0.0

small change to plots