[fmt] Format converters modules and tests

[RMeli]

[fmt] Format converters modules and tests. Some files actives in current PRs are ignored and will be formatted once the corresponding PRs are merged (see #4815).

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📚 Documentation preview 📚: https://mdanalysis--4850.org.readthedocs.build/en/4850/

[pep8speaks]

Hello @RMeli! Thanks for updating this PR. We checked the lines you've touched for PEP 8 issues, and found:

• In the file testsuite/MDAnalysisTests/converters/test_parmed.py:

Line 274:35: E203 whitespace before ':'
Line 274:48: E203 whitespace before ':'
Line 279:46: E203 whitespace before ':'
Line 279:59: E203 whitespace before ':'

• In the file testsuite/MDAnalysisTests/converters/test_parmed_parser.py:

Line 140:46: E203 whitespace before ':'

• In the file testsuite/MDAnalysisTests/converters/test_rdkit.py:

Line 487:80: E501 line too long (80 > 79 characters)
Line 685:80: E501 line too long (85 > 79 characters)
Line 686:80: E501 line too long (84 > 79 characters)
Line 687:80: E501 line too long (80 > 79 characters)
Line 688:80: E501 line too long (88 > 79 characters)
Line 690:80: E501 line too long (121 > 79 characters)
Line 692:80: E501 line too long (97 > 79 characters)
Line 693:80: E501 line too long (95 > 79 characters)
Line 696:80: E501 line too long (85 > 79 characters)

Comment last updated at 2024-12-20 22:28:31 UTC

[codecov]

Codecov Report

Attention: Patch coverage is 95.55556% with 4 lines in your changes missing coverage. Please review.

Project coverage is 93.65%. Comparing base (4f143fd) to head (19a6980).
Report is 1 commits behind head on develop.

Files with missing lines	Patch %	Lines
package/MDAnalysis/converters/OpenMMParser.py	71.42%	1 Missing and 1 partial ⚠️
package/MDAnalysis/converters/ParmEd.py	94.87%	1 Missing and 1 partial ⚠️

Additional details and impacted files

@@           Coverage Diff            @@
##           develop    #4850   +/-   ##
========================================
  Coverage    93.65%   93.65%           
========================================
  Files          177      177           
  Lines        21779    21779           
  Branches      3064     3064           
========================================
  Hits         20398    20398           
  Misses         929      929           
  Partials       452      452           

☔ View full report in Codecov by Sentry.
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[marinegor]

LGTM.