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@MaayanLab

Ma'ayan Lab

Developing Computational Methods to Study the Complexity of Regulatory Networks in Mammalian Cells

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  1. appyter appyter Public

    jinja2-enabled jupyter notebooks

    Python 37 6

  2. appyter-catalog appyter-catalog Public

    A catalog of appyter notebooks

    Jupyter Notebook 40 48

  3. archs4 archs4 Public

    ARCHS4 RNA-seq processing scripts and web server pages.

    JavaScript 61 12

Repositories

Showing 10 of 387 repositories
  • appyter Public

    jinja2-enabled jupyter notebooks

    MaayanLab/appyter’s past year of commit activity
    Python 37 6 15 9 Updated Dec 5, 2025
  • gsfm-predictions Public
    MaayanLab/gsfm-predictions’s past year of commit activity
    TypeScript 0 0 1 0 Updated Dec 4, 2025
  • Knowledge-Graph-UI Public

    Knowledge-Graph-UI (KG-UI) is an open-source web-based user interface built for KGs stored in Neo4j. The UI features Cypher queries for viewing immediate neighbors as well as shortest paths between two entities. Additionally, the API can be extended to add other functions such as enrichment analysis, and specialized queries. Example implementation:

    MaayanLab/Knowledge-Graph-UI’s past year of commit activity
    TypeScript 17 18 5 1 Updated Dec 2, 2025
  • DRC-Portals Public

    This repo has the code for the CFDE Workbench. The workbench serves the CFDE Information Portal and the CFDE Data Portal

    MaayanLab/DRC-Portals’s past year of commit activity
    TypeScript 0 0 20 2 Updated Nov 21, 2025
  • sc2DAT Public
    MaayanLab/sc2DAT’s past year of commit activity
    JavaScript 1 0 2 0 Updated Nov 21, 2025
  • datadistillery-kg Public
    MaayanLab/datadistillery-kg’s past year of commit activity
    Jupyter Notebook 0 0 4 0 Updated Nov 18, 2025
  • Enrichr-Viz-Appyter Public

    Appyter for enrichr canvases, scatter plots, and Manhattan plots

    MaayanLab/Enrichr-Viz-Appyter’s past year of commit activity
    Jupyter Notebook 0 2 3 0 Updated Nov 14, 2025
  • proxy Public

    A convenient and generic proxy image

    MaayanLab/proxy’s past year of commit activity
    Shell 0 Apache-2.0 1 0 0 Updated Oct 31, 2025
  • ChEA-KG-UI Public Forked from MaayanLab/Knowledge-Graph-UI

    Knowledge-Graph-UI (KG-UI) is an open-source web-based user interface built for KGs stored in Neo4j. The UI features Cypher queries for viewing immediate neighbors as well as shortest paths between two entities. Additionally, the API can be extended to add other functions such as enrichment analysis, and specialized queries.

    MaayanLab/ChEA-KG-UI’s past year of commit activity
    TypeScript 0 GPL-3.0 18 0 0 Updated Oct 28, 2025
  • mcp-template Public

    template for mcp server using the typescript sdk

    MaayanLab/mcp-template’s past year of commit activity
    TypeScript 0 0 0 0 Updated Oct 27, 2025
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