FEAT test_sciex.ipynb using smaller wiff file

MannLabs · May 16, 2024 · 74e7222 · 74e7222
1 parent ab67b7e
commit 74e7222
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Showing 3 changed files with 5 additions and 3 deletions.
diff --git a/.gitignore b/.gitignore
@@ -1,5 +1,6 @@
 *.raw
 *.wiff
+*.wiff2
 *.d
 *.scan
 

diff --git a/nbs_tests/test_scanning_swath.ipynb → nbs_tests/test_sciex.ipynb b/nbs_tests/test_scanning_swath.ipynb → nbs_tests/test_sciex.ipynb
@@ -20,7 +20,7 @@
     "\n",
     "raw_data = SciexWiffData()\n",
     "raw_data.import_raw(\n",
-    "    \"./test_data/20201215_sswath_1min_5ug_1.wiff\"\n",
+    "    \"./test_data/02112022_Zeno1_TiHe_DIAMA_HeLa_200ng_EVO5_01.wiff\"\n",
     ")\n",
     "raw_data.spectrum_df"
    ]

diff --git a/tests/download_test_data.py b/tests/download_test_data.py
@@ -14,8 +14,9 @@ def download_file(url, local_filename):
 url_template = "https://datashare.biochem.mpg.de/s/GOiZGGOhrHzS54M/download?path=%2F&files={}"
 output_template = "../nbs_tests/test_data/{}"
 test_files = [
-    "20201215_sswath_1min_5ug_1.wiff",
-    "20201215_sswath_1min_5ug_1.wiff.scan",
+    "02112022_Zeno1_TiHe_DIAMA_HeLa_200ng_EVO5_01.wiff",
+    "02112022_Zeno1_TiHe_DIAMA_HeLa_200ng_EVO5_01.wiff2",
+    "02112022_Zeno1_TiHe_DIAMA_HeLa_200ng_EVO5_01.wiff.scan",
     "iRT.raw",
     "iRT_DIA.raw",
     "multinotch.raw",