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@OHDSI

Observational Health Data Sciences and Informatics

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  1. CommonDataModel CommonDataModel Public

    Definition and DDLs for the OMOP Common Data Model (CDM)

    HTML 909 457

  2. Vocabulary-v5.0 Vocabulary-v5.0 Public

    Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.

    PLpgSQL 227 75

  3. Atlas Atlas Public

    ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data

    JavaScript 276 139

  4. Cyclops Cyclops Public

    Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized regressions.

    C++ 39 33

  5. CohortMethod CohortMethod Public

    An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.

    R 82 59

  6. PatientLevelPrediction PatientLevelPrediction Public

    An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.

    HTML 189 90

Repositories

Showing 10 of 318 repositories
  • OmopSketch Public
    OHDSI/OmopSketch’s past year of commit activity
    R 1 Apache-2.0 0 5 0 Updated Jan 16, 2025
  • Arachne Public

    Arachne Data Node web application

    OHDSI/Arachne’s past year of commit activity
    TypeScript 1 Apache-2.0 1 11 1 Updated Jan 16, 2025
  • ClinicalCharacteristics Public

    [under development] table shell approach to OMOP characterization

    OHDSI/ClinicalCharacteristics’s past year of commit activity
    R 0 Apache-2.0 1 11 1 Updated Jan 15, 2025
  • DatabaseConnector Public

    An R package for connecting to databases using JDBC.

    OHDSI/DatabaseConnector’s past year of commit activity
    R 55 83 30 (1 issue needs help) 2 Updated Jan 15, 2025
  • Vocabulary-v5.0 Public

    Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.

    OHDSI/Vocabulary-v5.0’s past year of commit activity
    PLpgSQL 227 Unlicense 75 223 11 Updated Jan 15, 2025
  • Bouzyges Public
    OHDSI/Bouzyges’s past year of commit activity
    Python 4 GPL-3.0 1 0 0 Updated Jan 15, 2025
  • ArachneExecutionEngine Public

    Arachne Execution Engine is a component used to execute remote SQL or R code. It is used by both Arachne Data Node as well as WebAPI

    OHDSI/ArachneExecutionEngine’s past year of commit activity
    PLpgSQL 8 8 2 2 Updated Jan 15, 2025
  • Andromeda Public

    AsynchroNous Disk-based Representation of MassivE DAta: An R package aimed at replacing ff for storing large data objects.

    OHDSI/Andromeda’s past year of commit activity
    R 11 13 17 0 Updated Jan 15, 2025
  • CohortConstructor Public
    OHDSI/CohortConstructor’s past year of commit activity
    R 1 Apache-2.0 0 36 3 Updated Jan 15, 2025
  • PatientLevelPrediction Public

    An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.

    OHDSI/PatientLevelPrediction’s past year of commit activity
    HTML 189 90 36 (2 issues need help) 2 Updated Jan 14, 2025
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