Remove duplicated rows in variant calling

PathoGenOmics-Lab · Sep 25, 2023 · 101dda4 · 101dda4
1 parent f167e5a
commit 101dda4
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/workflow/scripts/filter_tsv.R b/workflow/scripts/filter_tsv.R
@@ -43,7 +43,9 @@ data <- mutate(
         TRUE             ~  "No"
     )
 )
+# Remove duplicated features
 
+data <- distinct(data, pick(!GFF_FEATURE), .keep_all = TRUE)
 
 log_info("Saving results")
 write_tsv(