Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

some connectors and ingestors added #11

Closed
wants to merge 24 commits into from
Closed
Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
24 commits
Select commit Hold shift + click to select a range
f7cd091
some connectors and ingestors added
the-non-expert Aug 13, 2023
cfa6060
Merge branch 'main' of https://github.com/Querent-ai/querent-ai into …
the-non-expert Aug 14, 2023
4473874
Merge branch 'main' of https://github.com/Querent-ai/querent-ai into …
the-non-expert Aug 15, 2023
2eb30d8
Merge branch 'main' of https://github.com/Querent-ai/querent-ai into …
the-non-expert Aug 16, 2023
a6c47f2
aws collecter + tests
the-non-expert Aug 17, 2023
d69451d
Merge branch 'main' of https://github.com/Querent-ai/querent-ai into …
the-non-expert Aug 17, 2023
ca054f8
webscaper added to the determine backend function in the resolver.
the-non-expert Aug 17, 2023
66328e2
gcs collector and tests added.
the-non-expert Aug 18, 2023
c532bcd
Adding test cases for webscrapping
Ansh5461 Aug 19, 2023
ede0117
Added test cases for webscrapper
Ansh5461 Aug 19, 2023
3f0c2da
Merge branch 'main' of https://github.com/Querent-ai/querent-ai into …
the-non-expert Aug 29, 2023
c1e6ac8
Merge branch 'ayush' of https://github.com/Querent-ai/querent-ai into…
the-non-expert Aug 29, 2023
0ae1439
chenging grpc to gcs
the-non-expert Aug 29, 2023
7b186b8
tests for gcs, aws and webscaper
the-non-expert Aug 30, 2023
d14d900
dependency changes
the-non-expert Aug 31, 2023
70579fa
dependancy added.
the-non-expert Aug 31, 2023
938a81c
dependancy added v2
the-non-expert Aug 31, 2023
b419e2d
clean up
the-non-expert Aug 31, 2023
048c11c
path changed
the-non-expert Aug 31, 2023
283a07e
clean up.
the-non-expert Aug 31, 2023
88f0a03
Merge branch 'main' of https://github.com/Querent-ai/querent-ai into …
the-non-expert Aug 31, 2023
452f0da
credentials changed to env variables for gcs
the-non-expert Sep 2, 2023
ef308a0
setting up the env variables for credentials for aws and gcs
the-non-expert Sep 2, 2023
8a9dea5
aws collector and tests modified
the-non-expert Sep 6, 2023
File filter

Filter by extension

Filter by extension


Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
Empty file.
70 changes: 70 additions & 0 deletions querent/collectors/aws/aws_collector.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,70 @@
import asyncio
from typing import AsyncGenerator
import io

import aiofiles
from querent.config.collector_config import CollectorBackend, S3CollectConfig
from querent.collectors.collector_base import Collector
from querent.collectors.collector_factory import CollectorFactory
from querent.collectors.collector_result import CollectorResult
from querent.common.uri import Uri
import boto3


class AWSCollector(Collector):
def __init__(self, config: S3CollectConfig, prefix: str):
self.bucket_name = config["bucket"]
self.region = config["region"]
self.access_key = config["access_key"]
self.secret_key = config["secret_key"]
self.chunk_size = 1024
self.s3_client = boto3.client(
's3',
aws_access_key_id=self.access_key,
aws_secret_access_key=self.secret_key,
region_name=self.region
)
self.prefix = str(prefix)

async def connect(self):
pass # No asynchronous connection needed for boto3

async def disconnect(self):
pass # No asynchronous disconnect needed for boto3

async def poll(self) -> AsyncGenerator[CollectorResult, None]:
response = self.s3_client.list_objects_v2(
Bucket=self.bucket_name)

for obj in response.get('Contents', []):
file = self.download_object_as_byte_stream(obj['Key'])
async for chunk in self.read_chunks(file):
yield CollectorResult({"object_key": obj['Key'], "chunk": chunk})

async def read_chunks(self, file):
while True:
chunk = file.read(self.chunk_size)
if not chunk:
break
yield chunk

# def download_object(self, object_key):
# file_path = object_key # Set your desired file path
# self.s3_client.download_file(
# self.bucket_name, object_key, file_path)
# return open(file_path, 'rb')

def download_object_as_byte_stream(self, object_key):
byte_stream = io.BytesIO()
self.s3_client.download_fileobj(
self.bucket_name, object_key, byte_stream)
byte_stream.seek(0) # Rewind the stream to the beginning
return byte_stream


class AWSCollectorFactory(CollectorFactory):
def backend(self) -> CollectorBackend:
return CollectorBackend.S3

def resolve(self, uri: Uri, config: S3CollectConfig) -> Collector:
return AWSCollector(config, uri)
12 changes: 11 additions & 1 deletion querent/collectors/collector_resolver.py
Original file line number Diff line number Diff line change
@@ -1,4 +1,6 @@
from typing import Optional
from querent.collectors.gcs.gcs_collector import GCSCollectorFactory
from querent.collectors.aws.aws_collector import AWSCollectorFactory
from querent.collectors.fs.fs_collector import FSCollectorFactory
from querent.collectors.webscaper.web_scraper_collector import WebScraperFactory
from querent.config.collector_config import CollectConfig, CollectorBackend
Expand All @@ -14,7 +16,9 @@ class CollectorResolver:
def __init__(self):
self.collector_factories = {
CollectorBackend.LocalFile: FSCollectorFactory(),
CollectorBackend.S3: AWSCollectorFactory(),
CollectorBackend.WebScraper: WebScraperFactory(),
CollectorBackend.Gcs: GCSCollectorFactory()
# Add other collector factories as needed
}

Expand All @@ -32,7 +36,13 @@ def resolve(self, uri: Uri, config: CollectConfig) -> Optional[Collector]:
def _determine_backend(self, protocol: Protocol) -> CollectorBackend:
if protocol.is_file_storage():
return CollectorBackend.LocalFile
if protocol.is_webscrapper():
elif protocol.is_s3():
return CollectorBackend.S3
elif protocol.is_webscraper():
return CollectorBackend.WebScraper
elif protocol.is_gcs():
return CollectorBackend.Gcs
elif protocol.is_webscraper():
return CollectorBackend.WebScraper
else:
raise CollectorResolverError(
Expand Down
Empty file.
79 changes: 79 additions & 0 deletions querent/collectors/gcs/gcs_collector.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,79 @@
#

import asyncio
from typing import AsyncGenerator

import aiofiles
from querent.config.collector_config import GcsCollectConfig
from querent.config.collector_config import CollectorBackend
from querent.collectors.collector_base import Collector
from querent.collectors.collector_factory import CollectorFactory
from querent.collectors.collector_result import CollectorResult
from querent.common.uri import Uri
import aiohttp
from google.cloud import storage
import os
from dotenv import load_dotenv

load_dotenv()

credentials_info = os.getenv('GOOGLE_APPLICATION_CREDENTIALS')
bucket_name = os.getenv("GOOGLE_BUCKET_NAME")


class GCSCollector(Collector):
def __init__(self, config: GcsCollectConfig):
self.bucket_name = config.bucket
self.credentials = config.credentials
self.client = None

async def connect(self):
if not self.client:
self.client = storage.Client.from_service_account_json(
self.credentials)

async def disconnect(self):
if self.client is not None:
self.client.close()
self.client = None

async def poll(self) -> AsyncGenerator[CollectorResult, None]:
# Make sure to connect the client before using it
await self.connect()

try:
bucket = self.client.get_bucket(self.bucket_name)
blobs = bucket.list_blobs()
for blob in blobs:
async with self.download_blob(blob) as file:
async for chunk in self.read_chunks(file):
yield CollectorResult({"object_key": blob.name, "chunk": chunk})
finally:
# Disconnect the client when done
await self.disconnect()

async def read_chunks(self, file):
while True:
chunk = await file.read(self.chunk_size)
if not chunk:
break
yield chunk

async def download_blob(self, blob):
file = aiofiles.open(blob.name, 'wb')
await file.__aenter__()
with blob.open("rb") as blob_file:
await file.write(await blob_file.read())
return file


class GCSCollectorFactory(CollectorFactory):
def backend(self) -> CollectorBackend:
return CollectorBackend.Gcs

def resolve(self, uri: Uri, config: GcsCollectConfig) -> Collector:
config = GcsCollectConfig(
bucket=bucket_name,
credentials=credentials_info
)
return GCSCollector(config)
4 changes: 2 additions & 2 deletions querent/collectors/webscaper/web_scraper_collector.py
Original file line number Diff line number Diff line change
Expand Up @@ -22,8 +22,8 @@ async def poll(self):

async def scrape_website(self, website_url: str):
content = WebpageExtractor().extract_with_bs4(website_url)
max_length = len(" ".join(content.split(" ")[:600]))
return CollectedBytes(data=content[:max_length], file=None, error=None)
max_length = len(' '.join(content.split(" ")[:600]))
return CollectedBytes(file=None, data=content[:max_length], error=None)


class WebScraperFactory(CollectorFactory):
Expand Down
10 changes: 5 additions & 5 deletions querent/common/uri.py
Original file line number Diff line number Diff line change
Expand Up @@ -9,7 +9,7 @@
class Protocol(enum.Enum):
Azure = "azure"
File = "file"
Grpc = "grpc"
Gcs = "gcs"
PostgreSQL = "postgresql"
Ram = "ram"
S3 = "s3"
Expand All @@ -21,8 +21,8 @@ def is_azure(self) -> bool:
def is_file(self) -> bool:
return self == Protocol.File

def is_grpc(self) -> bool:
return self == Protocol.Grpc
def is_gcs(self) -> bool:
return self == Protocol.Gcs

def is_postgresql(self) -> bool:
return self == Protocol.PostgreSQL
Expand All @@ -42,7 +42,7 @@ def is_object_storage(self) -> bool:
def is_database(self) -> bool:
return self == Protocol.PostgreSQL

def is_webscrapper(self) -> bool:
def is_webscraper(self) -> bool:
return self == Protocol.Webscraper


Expand Down Expand Up @@ -70,7 +70,7 @@ def extension(self) -> Optional[str]:

@property
def path(self) -> str:
return self.uri[self.protocol_idx + len(self.PROTOCOL_SEPARATOR) :]
return self.uri[self.protocol_idx + len(self.PROTOCOL_SEPARATOR):]

def as_str(self) -> str:
return self.uri
Expand Down
11 changes: 7 additions & 4 deletions querent/config/collector_config.py
Original file line number Diff line number Diff line change
Expand Up @@ -27,19 +27,21 @@ class S3CollectConfig(BaseModel):
region: str
access_key: str
secret_key: str
chunk: int = 1024


class GcsCollectConfig(BaseModel):
bucket: str
region: str
access_key: str
secret_key: str
credentials: str
# chunk: int = 1024


class WebScraperConfig(BaseModel):
website_url: str = Field(
..., description="The URL of the website to scrape."
)


class CollectConfigWrapper(BaseModel):
backend: CollectorBackend
config: Optional[BaseModel] = None
Expand All @@ -59,4 +61,5 @@ def from_collect_config(cls, collect_config: CollectConfig):
backend=CollectorBackend.WebScraper, config=WebScraperConfig()
)
else:
raise ValueError(f"Unsupported collector backend: {collect_config.backend}")
raise ValueError(
f"Unsupported collector backend: {collect_config.backend}")
70 changes: 70 additions & 0 deletions querent/connectors/aws_connector.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,70 @@
import boto3
from botocore.exceptions import NoCredentialsError, PartialCredentialsError, BotoCoreError

def initialize_s3_resource():
try:
s3_resource = boto3.resource('s3',
aws_access_key_id='YOUR_ACCESS_KEY',
aws_secret_access_key='YOUR_SECRET_KEY',
region_name='YOUR_REGION')
return s3_resource
except (PartialCredentialsError, BotoCoreError) as e:
print(f"Error initializing S3 resource: {e}")
return None

def list_objects(bucket_name):
try:
s3_resource = initialize_s3_resource()
if s3_resource is None:
return []

bucket = s3_resource.Bucket(bucket_name)
objects = list(bucket.objects.all())
return objects
except BotoCoreError as e:
print(f"Error listing objects: {e}")
return []

def download_file(bucket_name, s3_key, local_path):
try:
s3_resource = initialize_s3_resource()
if s3_resource is None:
return False

s3_resource.Bucket(bucket_name).download_file(s3_key, local_path)
return True
except (BotoCoreError, NoCredentialsError) as e:
print(f"Error downloading file: {e}")
return False

def upload_file(bucket_name, s3_key, local_path):
try:
s3_resource = initialize_s3_resource()
if s3_resource is None:
return False

s3_resource.Bucket(bucket_name).upload_file(local_path, s3_key)
return True
except (BotoCoreError, NoCredentialsError) as e:
print(f"Error uploading file: {e}")
return False

def delete_object(bucket_name, s3_key):
try:
s3_resource = initialize_s3_resource()
if s3_resource is None:
return False

s3_resource.Object(bucket_name, s3_key).delete()
return True
except (BotoCoreError, NoCredentialsError) as e:
print(f"Error deleting object: {e}")
return False

# Usage
bucket_name = 'your-s3-bucket-name'
object_list = list_objects(bucket_name)
for obj in object_list:
print(obj.key)

# Remember to replace 'YOUR_ACCESS_KEY', 'YOUR_SECRET_KEY', and 'YOUR_REGION' with your actual credentials.
15 changes: 10 additions & 5 deletions querent/tools/web_page_extractor.py
Original file line number Diff line number Diff line change
Expand Up @@ -76,7 +76,8 @@ def extract_with_3k(self, url):
article = Article(url, config=config)
article.set_html(html_content)
article.parse()
content = article.text.replace("\t", " ").replace("\n", " ").strip()
content = article.text.replace(
'\t', ' ').replace('\n', ' ').strip()

return content[:1500]

Expand Down Expand Up @@ -131,7 +132,8 @@ def extract_with_bs4(self, url):
["main", "article", "section", "div"]
)
if main_content_areas:
main_content = max(main_content_areas, key=lambda x: len(x.text))
main_content = max(main_content_areas,
key=lambda x: len(x.text))
content_tags = ["p", "h1", "h2", "h3", "h4", "h5", "h6"]
content = " ".join(
[
Expand Down Expand Up @@ -224,18 +226,21 @@ def extract_with_lxml(self, url):
tree = html.fromstring(html_content)
paragraphs = tree.cssselect("p, h1, h2, h3, h4, h5, h6")
content = " ".join(
[para.text_content() for para in paragraphs if para.text_content()]
[para.text_content()
for para in paragraphs if para.text_content()]
)
content = content.replace("\t", " ").replace("\n", " ").strip()

return content

except ArticleException as ae:
logger.error("Error while extracting text from HTML (lxml): {str(ae)}")
logger.error(
"Error while extracting text from HTML (lxml): {str(ae)}")
return ""

except RequestException as re:
logger.error(f"Error while making the request to the URL (lxml): {str(re)}")
logger.error(
f"Error while making the request to the URL (lxml): {str(re)}")
return ""

except Exception as e:
Expand Down
3 changes: 3 additions & 0 deletions requirements.txt
Original file line number Diff line number Diff line change
Expand Up @@ -155,4 +155,7 @@ duckduckgo-search==3.8.3
asyncio==3.4.3
aiofiles
pytest-asyncio
google-cloud-storage
google-cloud
boto3
pymupdf
Binary file not shown.
Loading
Loading