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TADA_CreateParamRef() and TADA_CreateParamUseRef() #555

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33429a3
TADA_CreateParamRef() and TADA_CreateParamUseRef()
wokenny13 Dec 13, 2024
7e5c6dd
pushed devtool document()
wokenny13 Dec 13, 2024
785e4c7
Merge branch 'develop' into Create-Module-3-Reference-Tables
wokenny13 Dec 13, 2024
359d20e
Update WORDLIST
hillarymarler Dec 16, 2024
df513ad
Update R documentation for errors
wokenny13 Dec 16, 2024
2816e3e
updates
wokenny13 Dec 16, 2024
c9d4ad2
arg input name misspell fix and removal of intermediate objects
wokenny13 Dec 16, 2024
67da081
Update CriteriaInputs.R
wokenny13 Dec 16, 2024
fb47bfd
Update CriteriaInputs.R
wokenny13 Dec 16, 2024
c513fb7
Changed order of creating ATTAINS_param_all variable
wokenny13 Dec 16, 2024
75be2ec
Update test-URLChecker.R
hillarymarler Dec 16, 2024
8514702
Update CriteriaInputs.R
hillarymarler Dec 16, 2024
797230f
Update CriteriaInputs.R
hillarymarler Dec 17, 2024
b328058
Updated ATTAINS.FlagParameterName
wokenny13 Dec 17, 2024
14a7f8c
Mod 3 vignette testing and updates
wokenny13 Dec 18, 2024
5359692
Update documentation and excel formula logic
wokenny13 Dec 20, 2024
ab32395
Speed up loops within both functions and additional edits
wokenny13 Dec 20, 2024
4461bfa
Additional comments and further updates
wokenny13 Dec 23, 2024
44f9246
Addressed some ref documentation
wokenny13 Dec 23, 2024
38912fd
Merge branch 'develop' into Create-Module-3-Reference-Tables
cristinamullin Dec 23, 2024
45df19d
run spelling check and update wordlist
cristinamullin Dec 23, 2024
22c0f68
Merge branch 'Create-Module-3-Reference-Tables' of https://github.com…
wokenny13 Dec 24, 2024
7b69b29
Update CST EPA 304a Ref table
wokenny13 Dec 24, 2024
e6b7357
CreateParamUseRef() and CST ref
wokenny13 Dec 24, 2024
661a63e
further updates to reflect dependencies on CST ref file changes
wokenny13 Dec 24, 2024
34ff02b
test ppt
cristinamullin Dec 27, 2024
6cc04b1
Format updates, text updates, mod 3 vignette updates
wokenny13 Dec 27, 2024
b4c3a71
Merge branch 'develop' into Create-Module-3-Reference-Tables
wokenny13 Dec 27, 2024
98c22b9
Update CriteriaInputs.R
wokenny13 Dec 27, 2024
17f59e7
update mod 3 vignette
wokenny13 Dec 27, 2024
d17bfdd
outline
cristinamullin Dec 27, 2024
20e0ddc
mod 3 vignette update
wokenny13 Dec 30, 2024
1d9f740
Update NMC Mar 2025.qmd
cristinamullin Dec 30, 2024
c84b16e
update workshop presentation
cristinamullin Dec 30, 2024
8cee958
Update NMC Mar 2025.qmd
cristinamullin Dec 30, 2024
bb694df
global variables message fix
wokenny13 Dec 31, 2024
42c06f3
Updates, global variable message handling, and text fixes
wokenny13 Dec 31, 2024
0fdf963
change to pptx
cristinamullin Jan 2, 2025
8970ec5
Notes and minor fixes
wokenny13 Jan 2, 2025
7396485
Removed function CreateAUIDRef()
wokenny13 Jan 3, 2025
6947abc
mods 1 and 3 review
cristinamullin Jan 3, 2025
b0bd5b4
Merge branch 'Create-Module-3-Reference-Tables' of https://github.com…
cristinamullin Jan 3, 2025
bd3a842
update example data
cristinamullin Jan 7, 2025
7db1fb1
update docs
cristinamullin Jan 7, 2025
7988b1b
update WQX ref and add test
cristinamullin Jan 8, 2025
2d0908a
AURef update, and CST.csv update
wokenny13 Jan 8, 2025
c2f5236
fix pH unit harmonization
cristinamullin Jan 8, 2025
3863ef5
style, update example data
cristinamullin Jan 8, 2025
dad6805
Mod 3 update and TADA_CreateAURef() function included
wokenny13 Jan 8, 2025
cf8c378
Merge branch 'Create-Module-3-Reference-Tables' of https://github.com…
wokenny13 Jan 8, 2025
d221275
Removed AU_ML crosswalk draft from this branch
wokenny13 Jan 8, 2025
cb3606a
remove export of in development functions in namespace
wokenny13 Jan 10, 2025
5bdc2a7
update TADAModule1_AdvancedTraining.Rmd
cristinamullin Jan 10, 2025
8a68960
use PH_NA_NA_STD UNITS
cristinamullin Jan 10, 2025
4c9702f
Update TADAModule3.Rmd
wokenny13 Jan 10, 2025
c9e85a0
Merge branch 'Create-Module-3-Reference-Tables' of https://github.com…
wokenny13 Jan 10, 2025
9acdd69
flag suspect pH units
cristinamullin Jan 10, 2025
8df3e2b
Merge branch 'Create-Module-3-Reference-Tables' of https://github.com…
wokenny13 Jan 10, 2025
80a4c70
update TADA_GetATTAINS docs
cristinamullin Jan 10, 2025
fc8dd69
Merge branch 'Create-Module-3-Reference-Tables' of https://github.com…
wokenny13 Jan 10, 2025
660a6dd
update refs, mod 3 updates
cristinamullin Jan 10, 2025
1a3ac3b
Mod 3 vignette updates
wokenny13 Jan 10, 2025
56542f9
Merge branch 'Create-Module-3-Reference-Tables' of https://github.com…
wokenny13 Jan 10, 2025
99831f7
Created a Dataframe with button function
wokenny13 Jan 10, 2025
b0820fd
Added missing @param
wokenny13 Jan 10, 2025
8414798
Update TADA_CreateParamUseRef.Rd
wokenny13 Jan 10, 2025
9a5d59a
Update TADAModule3.Rmd
wokenny13 Jan 14, 2025
3fa96ca
Update TADAModule3.Rmd
wokenny13 Jan 15, 2025
2339205
Update test-Utilities.R
wokenny13 Jan 21, 2025
38aabd8
Update CriteriaInputs.R
wokenny13 Jan 21, 2025
73b030c
Update TADAModule3.Rmd
hillarymarler Jan 21, 2025
d4b81e7
Update TADAModule3.Rmd
hillarymarler Jan 21, 2025
579a4d4
Update NMC Mar 2025.qmd
cristinamullin Jan 22, 2025
774b557
add section on contributing to tada
cristinamullin Jan 22, 2025
61cb2df
TADA updates
cristinamullin Jan 22, 2025
776221e
Update DESCRIPTION
cristinamullin Jan 23, 2025
fe1f52a
add TADA mod 2
cristinamullin Jan 23, 2025
908e7fe
adjust times
cristinamullin Jan 23, 2025
91363a1
Changed Organization_name to Organization_identifier
wokenny13 Jan 24, 2025
29820d0
Merge branch 'Create-Module-3-Reference-Tables' into NMC-Mar-2025
cristinamullin Jan 27, 2025
1983664
Merge branch 'develop' into Create-Module-3-Reference-Tables
wokenny13 Jan 28, 2025
c3df14a
Update TADA_AutoFilter.Rd
wokenny13 Jan 28, 2025
9961adb
Utilities.R from develop
wokenny13 Jan 29, 2025
731e659
Update examples
wokenny13 Jan 29, 2025
b4a8f60
Ran document() .Rd output
wokenny13 Jan 29, 2025
6ad665b
styler and document updates
wokenny13 Jan 30, 2025
6079e2d
Merge branch 'NMC-Mar-2025' into Create-Module-3-Reference-Tables
cristinamullin Jan 31, 2025
90050f3
Update NMC Mar 2025.qmd
cristinamullin Jan 31, 2025
833b405
update refs and example data
cristinamullin Jan 31, 2025
014a004
update mod 3 vignette
cristinamullin Feb 4, 2025
a4fe915
simplify
cristinamullin Feb 4, 2025
a638d69
add part A
cristinamullin Feb 4, 2025
e1990c9
Update .gitignore
cristinamullin Feb 5, 2025
7754a8e
add quarto
cristinamullin Feb 5, 2025
c26359c
Update DESCRIPTION
cristinamullin Feb 5, 2025
6835179
Update NMC Mar 2025.qmd
cristinamullin Feb 5, 2025
08fff92
render
cristinamullin Feb 5, 2025
15eb5c3
organize functions, update vignettes
cristinamullin Feb 5, 2025
3eb7860
reorganize
cristinamullin Feb 5, 2025
343094f
maintenance
cristinamullin Feb 5, 2025
5f634c4
fix TADA_AutoClean doc example
cristinamullin Feb 6, 2025
dddbd87
Cleaned and tidied up code
wokenny13 Feb 6, 2025
e0debd7
example rdoc error fix
wokenny13 Feb 6, 2025
3911cf9
Update NMC Mar 2025.qmd
cristinamullin Feb 7, 2025
207dd3b
change qmd to rmd
cristinamullin Feb 7, 2025
cd1187a
polish docs
cristinamullin Feb 10, 2025
a435e32
reorganize and add refs to maintenance.R
cristinamullin Feb 10, 2025
da1395e
update refs and example data
cristinamullin Feb 10, 2025
6a40a0b
usability improvements
cristinamullin Feb 10, 2025
698abbd
styler
cristinamullin Feb 11, 2025
4563170
remove NMC presentation
cristinamullin Feb 11, 2025
f554b55
fix note
cristinamullin Feb 11, 2025
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1 change: 1 addition & 0 deletions .Rbuildignore
Original file line number Diff line number Diff line change
Expand Up @@ -9,3 +9,4 @@ readme.html
.gitignore
^articles
^vignettes/articles$
^vignettes/articles/*_files$
5 changes: 5 additions & 0 deletions .gitignore
Original file line number Diff line number Diff line change
Expand Up @@ -26,3 +26,8 @@ testing_log.txt

# test data from AK
AK_EPATADA_troubleshooting

# built and rendered vignettes aren't tracked
inst/doc
vignettes/*.html
vignettes/*.R
13 changes: 8 additions & 5 deletions DESCRIPTION
Original file line number Diff line number Diff line change
Expand Up @@ -72,13 +72,14 @@ Imports:
nhdplusTools,
arcgislayers,
httr,
jsonlite,
rATTAINS
jsonlite,
openxlsx,
rATTAINS,
DT
Depends:
R (>= 3.5.0)
Suggests:
lwgeom,
DT,
RColorBrewer,
rmarkdown,
readr,
Expand All @@ -91,11 +92,13 @@ Suggests:
pkgdown,
spelling,
htmltools,
yaml
yaml,
remotes
VignetteBuilder: knitr, rmarkdown
Language: en-US
Config/testthat/edition: 3
Config/testthat/load-all: list(export_all = FALSE, helpers = FALSE)
URL: https://usepa.github.io/EPATADA/, https://github.com/USEPA/EPATADA, usepa.github.io/EPATADA
URL: https://usepa.github.io/EPATADA/, https://github.com/USEPA/EPATADA
LazyData: true
LazyDataCompression: xz
Config/Needs/website: rmarkdown
5 changes: 5 additions & 0 deletions NAMESPACE
Original file line number Diff line number Diff line change
Expand Up @@ -16,6 +16,8 @@ export(TADA_ConvertResultUnits)
export(TADA_ConvertSpecialChars)
export(TADA_CreateComparableID)
export(TADA_CreatePairRef)
export(TADA_CreateParamRef)
export(TADA_CreateParamUseRef)
export(TADA_CreateUnitRef)
export(TADA_DataRetrieval)
export(TADA_DepthProfilePlot)
Expand Down Expand Up @@ -43,10 +45,12 @@ export(TADA_FormatDelimitedString)
export(TADA_GetATTAINS)
export(TADA_GetATTAINSAUSiteCrosswalk)
export(TADA_GetATTAINSOrgIDsRef)
export(TADA_GetATTAINSParamUseOrgRef)
export(TADA_GetActivityTypeRef)
export(TADA_GetCharacteristicRef)
export(TADA_GetDetCondRef)
export(TADA_GetDetLimitRef)
export(TADA_GetEPACSTRef)
export(TADA_GetMeasureQualifierCodeRef)
export(TADA_GetMeasureUnitRef)
export(TADA_GetMonLocByOrgId)
Expand Down Expand Up @@ -79,6 +83,7 @@ export(TADA_SimpleCensoredMethods)
export(TADA_Stats)
export(TADA_SubstituteDeprecatedChars)
export(TADA_SummarizeColumn)
export(TADA_TableExport)
export(TADA_TwoCharacteristicScatterplot)
export(TADA_UniqueCharUnitSpeciation)
export(TADA_UpdateMonitoringLocationsInATTAINS)
Expand Down
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