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@VU-QCB

Vanderbilt University Quantitative & Chemical Biology Program

README.md

Vanderbilt University Quantitative & Chemical Biology Program

Home of the VU QCB PDAB Class

This site was created for the Practical Data Analaysis in Biosciences portion of the 1st year curriculum (CPBP 8306). Any content developed within the class that is appropriate to share publicly will be visible here.

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  1. .github .github Public

    Vanderbilt University Quantitative & Chemical Biology Program Public GitHub Repository

  2. PDAB_public PDAB_public Public

    Public repository for VU-QCB PDAB class

  3. vu-qcb.github.io vu-qcb.github.io Public

    The GitHub home page of Vanderbilt's Quantitative & Chemical Biology Program

  4. diamantopoulou-ctc-dynamics diamantopoulou-ctc-dynamics Public

    Forked from TheAcetoLab/diamantopoulou-ctc-dynamics

    R 1

  5. single_cell_classification single_cell_classification Public

    Forked from broadinstitute/single_cell_classification

    Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles

    R

  6. CCLE_heterogeneity CCLE_heterogeneity Public

    Forked from gabrielakinker/CCLE_heterogeneity

    Pan-cancer single-cell RNA-seq identifies recurring programs of cellular heterogeneity. Nat Genet. 2020; 52(11) 1208-1218. doi:10.1038/s41588-020-00726-6

    R

Repositories

Showing 10 of 11 repositories
  • CP_2023 Public Forked from pachterlab/CP_2023

    Lior Pachter lab - Specious Art of scRNA-seq

    VU-QCB/CP_2023’s past year of commit activity
    Jupyter Notebook 0 BSD-2-Clause 5 0 0 Updated Jan 18, 2024
  • CCLE_heterogeneity Public Forked from gabrielakinker/CCLE_heterogeneity

    Pan-cancer single-cell RNA-seq identifies recurring programs of cellular heterogeneity. Nat Genet. 2020; 52(11) 1208-1218. doi:10.1038/s41588-020-00726-6

    VU-QCB/CCLE_heterogeneity’s past year of commit activity
    R 0 18 0 0 Updated Dec 5, 2022
  • diamantopoulou-ctc-dynamics Public Forked from TheAcetoLab/diamantopoulou-ctc-dynamics
    VU-QCB/diamantopoulou-ctc-dynamics’s past year of commit activity
    R 0 3 0 0 Updated Dec 5, 2022
  • single_cell_classification Public Forked from broadinstitute/single_cell_classification

    Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles

    VU-QCB/single_cell_classification’s past year of commit activity
    R 0 8 0 0 Updated Nov 26, 2022
  • SSIT Public Forked from MunskyGroup/SSIT
    VU-QCB/SSIT’s past year of commit activity
    MATLAB 0 BSD-3-Clause 8 0 0 Updated Nov 10, 2022
  • mitocheck_data Public Forked from WayScience/mitocheck_data

    All information regarding the download and processing of Mitocheck data from IDR study with accession idr0013 (screenA).

    VU-QCB/mitocheck_data’s past year of commit activity
    Jupyter Notebook 0 CC0-1.0 5 0 0 Updated Nov 2, 2022
  • vu-qcb.github.io Public

    The GitHub home page of Vanderbilt's Quantitative & Chemical Biology Program

    VU-QCB/vu-qcb.github.io’s past year of commit activity
    0 GPL-3.0 0 0 0 Updated Sep 22, 2022
  • PDAB_public Public

    Public repository for VU-QCB PDAB class

    VU-QCB/PDAB_public’s past year of commit activity
    0 GPL-3.0 0 0 0 Updated Sep 19, 2022
  • .github Public

    Vanderbilt University Quantitative & Chemical Biology Program Public GitHub Repository

    VU-QCB/.github’s past year of commit activity
    0 GPL-3.0 0 0 0 Updated Sep 13, 2022
  • singlecell_endodiff_paper Public Forked from single-cell-genetics/singlecell_endodiff_paper

    Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression

    VU-QCB/singlecell_endodiff_paper’s past year of commit activity
    Jupyter Notebook 0 Apache-2.0 7 0 0 Updated Jul 27, 2022
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