4. Find Correlated Summary Statistics

We did steps 4-11 on volumes attached to CyVerse or Jetstream instances.

Working in /mnt/ABC_AJmodels_instant_newreal. (/mnt is the attached volume)

working with files:
input_ABCtoolbox_M1_HPC_OSG_2.txt
input_ABCtoolbox_M2_HPC_OSG_2.txt
input_ABCtoolbox_M3_HPC_OSG_2.txt
which are a combination of simulations with instantaneous growth from HPC and OSG, and have 1,275,807, 1,446,125, 1,343,711 simulations.

Use ABCtoolbox task estimate and pruneCorrelatedStats on 1,218,497 simulations.

ABCtoolbox test_ABC_correlatedstats1.txt

where test_ABC_correlatedstats1.txt is:

task estimate
simName input_ABCtoolbox_M1_HPC_OSG_2.txt;input_ABCtoolbox_M2_HPC_OSG_2.txt;input_ABCtoolbox_M3_HPC_OSG_2.txt
obsName real_output_M23.summary
params 2-6,8-14,16-22;2-6,8-15,17-24;2-6,8-16,18-26
numRetained 1000
maxReadSims 1218497
outputPrefixe ABC_correlatedstats1_1218497
pruneCorrelatedStats 1
logFile ABC_correlatedstats1_1218497.log
verbose