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@applicativesystem applicativesystem released this 07 Oct 12:13
· 4 commits to main since this release
gauavsablok@gauravsablok ~/Desktop/codecreatede/golang/go-diamond-tags ±main⚡ » \
./godiamondtags
Analyzer for the diamond aligner and pacbio reads for hints

Usage:
  analyze [command]

Available Commands:
  alignment
  completion  Generate the autocompletion script for the specified shell
  help        Help about any command

Flags:
  -h, --help   help for analyze

Use "analyze [command] --help" for more information about a command.
gauavsablok@gauravsablok ~/Desktop/codecreatede/golang/go-diamond-tags ±main⚡ » \
./godiamondtags alignment -h
Analyzes the hsp from the diamond read to protein alignment

Usage:
  analyze alignment [flags]

Flags:
  -a, --alignmentfile string   alignment (default "alignment file to be analyzed")
  -h, --help                   help for alignment
  -p, --pacbioreads string     pacbio file (default "pacbio reads file")

gauavsablok@gauravsablok ~/Desktop/codecreatede/golang/go-diamond-tags ±main⚡ » \
./godiamondtags alignment -a matches.tsv -p ./samplefiles/pacbioreads.fasta
chr10:66478458-66505490 1.0061776347427218
chr10:66478458-66505490 0.9026005252839123
chr11:66478458-66505490 0.8952021603225687
chr11:66478458-66505490 1.0875596493175008
gauavsablok@gauravsablok ~/Desktop/codecreatede/golang/go-diamond-tags ±main⚡ » \
cat coveragestimation.txt
chr10:66478458-66505490        1.0061776347427218
chr10:66478458-66505490        0.9026005252839123
chr11:66478458-66505490        0.8952021603225687
chr11:66478458-66505490        1.0875596493175008