remove clustered_events from default drop list

broadinstitute · Jan 29, 2025 · f9f7c15 · f9f7c15
1 parent 7180ae7
commit f9f7c15
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/WGS_pipeline/annotate_variants.wdl b/WGS_pipeline/annotate_variants.wdl
@@ -12,7 +12,7 @@ workflow annotateVariants {
     input {
         File input_vcf
         String sample_id
-        String bcftools_exclude_string = 'FILTER~"weak_evidence"||FILTER~"map_qual"||FILTER~"strand_bias"||FILTER~"slippage"||FILTER~"clustered_events"||FILTER~"base_qual"'
+        String bcftools_exclude_string = 'FILTER~"weak_evidence"||FILTER~"map_qual"||FILTER~"strand_bias"||FILTER~"slippage"||FILTER~"base_qual"'
         Int hgvs_boot_disk_size=100
         Int hgvs_disk_space=200
         Int oc_boot_disk_size=600