0.13.0

What's Changed

• Feature support cell ranger indexes by @golharam in #102
• Only read the key/value pair, if they both exist. by @golharam in #99
• Allow samplesheet to accept a file handle or a Path like object by @dsommer in #114
• Feature support more cellranger indexes by @accumb3ns in #118

New Contributors

• @dsommer made their first contribution in #114
• @accumb3ns made their first contribution in #118

Full Changelog: 0.11.0...0.13.0

0.11.0

Version bump to 0.10.0 (#97)

0.10.0

Features:

• Allow 10x cellranger barcode indexes in the index columns

0.9.4

Possibly allow install on Windows (#91)

0.9.3

Bugfix: successfully catch import errors for all the smart_open regre…

0.9.2

Revision to 0.9.2 (#86)

Better Install Instructions

0.9.1

Explicit bioconda instructions and better setup.py long_description (…

Drop `smart_open` install requirement

Breaking

To make use of the smart_open library, simply install it alongside sample-sheet as it is no longer vendored here.

Refreshed and more consistent API and support for more Sample Sheets

• Support for redundant Sample_ID with warning
• Ordered output of sample headers in .write() as they were read-in or assigned
• Case insensitive hashing for sample attributes

Allow reading formats as defined in the Illumina specification

Specifically formats with:

• blank lines
• non-comma terminated lines

Feature request from @andybearman