Artifact path is not valid: /pytest_workflow_l96jrqxj/freebayes_parallel_test_freebayes_parallel/work/20/ebd7d0eedc3c776ec6d2a108a8174e/chr22:0-40001.vcf.gz. Contains the following character: Colon : Invalid characters include: Double quote ", Colon :, Less than <, Greater than >, Vertical bar |, Asterisk *, Question mark ?, Carriage return \r, Line feed \n The following characters are not allowed in files that are uploaded due to limitations with certain file systems such as NTFS. To maintain file system agnostic behavior, these characters are intentionally not allowed to prevent potential problems with downloads on different file systems.

freebayes/splitbam conda

Artifact path is not valid: /pytest_workflow_xl2nr9tl/freebayes_parallel_test_freebayes_parallel/work/30/9aa9b5e7f89af8369bf436ee69dd55/chr22:0-40001.vcf.gz. Contains the following character: Colon : Invalid characters include: Double quote ", Colon :, Less than <, Greater than >, Vertical bar |, Asterisk *, Question mark ?, Carriage return \r, Line feed \n The following characters are not allowed in files that are uploaded due to limitations with certain file systems such as NTFS. To maintain file system agnostic behavior, these characters are intentionally not allowed to prevent potential problems with downloads on different file systems.

freebayes/splitbam conda

Process completed with exit code 1.

freebayes/chunk conda

Process completed with exit code 1.

freebayes/chunk conda

Artifact path is not valid: /pytest_workflow_gtda4xh0/freebayes_chunk_test_freebayes_chunk/work/87/f71be3079ae30d33eddc70968d5303/chr22:0-40001.vcf.gz. Contains the following character: Colon : Invalid characters include: Double quote ", Colon :, Less than <, Greater than >, Vertical bar |, Asterisk *, Question mark ?, Carriage return \r, Line feed \n The following characters are not allowed in files that are uploaded due to limitations with certain file systems such as NTFS. To maintain file system agnostic behavior, these characters are intentionally not allowed to prevent potential problems with downloads on different file systems.

samtools/stats conda

Process completed with exit code 1.

samtools/idxstats conda

Process completed with exit code 1.

tabix/tabix conda

Process completed with exit code 1.

bamaddrg singularity

The following actions uses node12 which is deprecated and will be forced to run on node16: eWaterCycle/setup-singularity@v5. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

bamtools/coverage singularity